Gene Hlac_1433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1433 
Symbol 
ID7400260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1442681 
End bp1443073 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content57% 
IMG OID643708494 
ProductPilT protein domain protein 
Protein accessionYP_002566091 
Protein GI222479854 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.697875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGG ACACGACGTT CATCATCGAC GTTCTACACG ACGATCGGGA CGCGATTCAA 
TATCTCGACC TCATTGAACG AGAGAATCGA CCGGAAAAGG TCTCTTCAAT AACGGTGCTC
GAACTGTACG AAGCGGTCCC GCAGTTGAAC GCTCCAGAGG AGCGTCGACA GGCGATCCTC
GACGTACTCG ACACGTGCCA CGCGGTCGTC GCCGACGAGA CCGTGATGCG AAAGGCCGGA
AAGATTTCTG GCTCGCTTCG CGCCCGTGAT GAGGAGATCG ACAGGGAAGA CTGCATCATC
GGAGCGACCG CGTTGTTGAA CGACGAGCCT GTCGTGACTC GTAATCACGA CCACTTCGAG
CGCATCGACG GTCTCGACGT CGAGACGTAC TGA
 
Protein sequence
MIEDTTFIID VLHDDRDAIQ YLDLIERENR PEKVSSITVL ELYEAVPQLN APEERRQAIL 
DVLDTCHAVV ADETVMRKAG KISGSLRARD EEIDREDCII GATALLNDEP VVTRNHDHFE
RIDGLDVETY