Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1425 |
Symbol | |
ID | 7400744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1435829 |
End bp | 1436344 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643708486 |
Product | protein of unknown function DUF21 |
Protein accession | YP_002566083 |
Protein GI | 222479846 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.758313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGGAG TCACACTCGG GTTAGCCGGG ATCGTAACGG TGACGGTGTT ACTGGCGCTC AGCGCGTTCT TCTCGAGTTC GGAGACCGCG ATCTTCTCGC TGCCGGCGGA GTGGTTCGAG CGGCAGGCCG CCACGGACGA TCCCCGAGCG CAGGTCCTGA AGGAGCTCTA CGACGACCCC CACCGGCTGC TGGTGACGCT GCTCGTCGGG AACAACGTCG TCAACATCGC GATATCGAGT ATCGTGACCG TTCTGGTTGC CAGTTACCTC CCCTCCGGTG CCGCGGTCGC GGTGGCGACC GTGTGTACGA GCTTTCTCGT CCTCGTGTTC GGCGAGATCG TCCCCAAGGC GTTCGGCCTC GGAAACGCCG AGCGGTGGTC GCTGCGGATC GCATCCCCGA TCCGACTGGT CGAGCGCGTC CTCTCGCCGC TCATCACGTT GTTCGACGGG ATCACCCGTC GGATGAACGC GTACATCAGC GGCGACGCGA ATATCGAGAA GCCGTACACG GATTGA
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Protein sequence | MVGVTLGLAG IVTVTVLLAL SAFFSSSETA IFSLPAEWFE RQAATDDPRA QVLKELYDDP HRLLVTLLVG NNVVNIAISS IVTVLVASYL PSGAAVAVAT VCTSFLVLVF GEIVPKAFGL GNAERWSLRI ASPIRLVERV LSPLITLFDG ITRRMNAYIS GDANIEKPYT D
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