Gene Hlac_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1425 
Symbol 
ID7400744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1435829 
End bp1436344 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content64% 
IMG OID643708486 
Productprotein of unknown function DUF21 
Protein accessionYP_002566083 
Protein GI222479846 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.758313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGAG TCACACTCGG GTTAGCCGGG ATCGTAACGG TGACGGTGTT ACTGGCGCTC 
AGCGCGTTCT TCTCGAGTTC GGAGACCGCG ATCTTCTCGC TGCCGGCGGA GTGGTTCGAG
CGGCAGGCCG CCACGGACGA TCCCCGAGCG CAGGTCCTGA AGGAGCTCTA CGACGACCCC
CACCGGCTGC TGGTGACGCT GCTCGTCGGG AACAACGTCG TCAACATCGC GATATCGAGT
ATCGTGACCG TTCTGGTTGC CAGTTACCTC CCCTCCGGTG CCGCGGTCGC GGTGGCGACC
GTGTGTACGA GCTTTCTCGT CCTCGTGTTC GGCGAGATCG TCCCCAAGGC GTTCGGCCTC
GGAAACGCCG AGCGGTGGTC GCTGCGGATC GCATCCCCGA TCCGACTGGT CGAGCGCGTC
CTCTCGCCGC TCATCACGTT GTTCGACGGG ATCACCCGTC GGATGAACGC GTACATCAGC
GGCGACGCGA ATATCGAGAA GCCGTACACG GATTGA
 
Protein sequence
MVGVTLGLAG IVTVTVLLAL SAFFSSSETA IFSLPAEWFE RQAATDDPRA QVLKELYDDP 
HRLLVTLLVG NNVVNIAISS IVTVLVASYL PSGAAVAVAT VCTSFLVLVF GEIVPKAFGL
GNAERWSLRI ASPIRLVERV LSPLITLFDG ITRRMNAYIS GDANIEKPYT D