Gene Hlac_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1409 
Symbol 
ID7400728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1420675 
End bp1421031 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content66% 
IMG OID643708470 
ProductUspA domain protein 
Protein accessionYP_002566067 
Protein GI222479830 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.379594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCAGG CGGAGGCCTT CGACGCGCGG GTCCACGTCC TCTACGTCGT GAACACGACG 
TACGCCGGCG TCGGCGCCGG CGGCAGCAAG AACGTCAACT CCCTCCGCGC CGAGGGCGAG
GAGGTGATCG AGGAGTTCGA ACAACTGCTC CGCGACGAGG ACGTTGATGT GGTCACGCGG
ATCGAAGAGG GAGACCCCCA CACGAAGATC ACGAAATACG CCGACGAGGA GACCGACATG
ATCGTCATGG GGACGCGAGG GCGCAGCGGG ATCGAGAAGT ACCTGCTCGG CAGCGTCACC
GAGAAGGTCG TGCGGACCGC CGACGTGCCC GTGTTCACGG TGCGGACGCC GGAGTAG
 
Protein sequence
MSQAEAFDAR VHVLYVVNTT YAGVGAGGSK NVNSLRAEGE EVIEEFEQLL RDEDVDVVTR 
IEEGDPHTKI TKYADEETDM IVMGTRGRSG IEKYLLGSVT EKVVRTADVP VFTVRTPE