Gene Hlac_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1402 
Symbol 
ID7400721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1410573 
End bp1411019 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content62% 
IMG OID643708463 
ProductNUDIX hydrolase 
Protein accessionYP_002566060 
Protein GI222479823 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCG AAGCGACCAG TGCCGGAGCC ATCCTCTTCC GCGACACCCG CGGCGAACGG 
GAGTACTTGC TCCTGAAGAG CCGACCGGGG GACTGGGAGT TCCCCAAGGG CGGGATCGAG
GGGGACGAGG AGCTCCAGCA GACGGCGATC AGGGAGGTGT CGGAGGAGGC CGGAATCGAA
GATTTCCGGC TGATCGACGG CTTCCGCAAG GAGTACGACT ACGTGTTTGA GGCGAACGGC
AACACCATCC ACAAGACGGT GCACCTGTTC ATCGCGCGCT CGTTCGAAGC GAGCGCCGAA
ATCTCGAACG AACACCGTGA CCTGCAGTGG CGCGACTACG ATCAGGCGCT CAACACGATC
ACGCAAACAG GCCCCCGAGA GATCTTAGAG GACGCCCACG ACTACCTCGA CGAGCGGAAA
GACGGGGACA CCGGCGAGTA CGTCTAA
 
Protein sequence
MTVEATSAGA ILFRDTRGER EYLLLKSRPG DWEFPKGGIE GDEELQQTAI REVSEEAGIE 
DFRLIDGFRK EYDYVFEANG NTIHKTVHLF IARSFEASAE ISNEHRDLQW RDYDQALNTI
TQTGPREILE DAHDYLDERK DGDTGEYV