| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1380 |
|---|
| Symbol | |
|---|
| ID | 7400699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1390871 |
|---|
| End bp | 1391230 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643708442 |
|---|
| Product | branched-chain amino acid transport |
|---|
| Protein accession | YP_002566039 |
|---|
| Protein GI | 222479802 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4392] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.551237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGCG GATCCCCACT TCCCATCGGC GGCTCGCTCG AAGTCTGGCT CGCCATCGTC
CTCATCGGGA TCGCGACGTA CGGGTTCCGG CTCTCCTTCA TCCACCTGTT CGGGCGGATC
GACGAGGTGC CCACCCGGAT CAAGCGCCCG CTCCGATACG TTCCGCCGGC GGTACTCGCG
GCGCTCGTGT TCCCCGATCT GGTGACGATC CGACCCTCGG TCGCCGCCAC GCTCGTCGAC
GAACGGCTGA TCGCGGGCGT CGTCGCCGGC GCGGTCGCAT GGCGCACGGA GAACGTGATG
GCGACCATCG CGAGCGGGAT GGTCACGCTG TGGCTGTTCC GGTTCGTCGT GTTCGCCTGA
|
|---|
| Protein sequence | MTGGSPLPIG GSLEVWLAIV LIGIATYGFR LSFIHLFGRI DEVPTRIKRP LRYVPPAVLA
ALVFPDLVTI RPSVAATLVD ERLIAGVVAG AVAWRTENVM ATIASGMVTL WLFRFVVFA
|
|---|
| |