Gene Hlac_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1373 
Symbol 
ID7400692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1384288 
End bp1385382 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content67% 
IMG OID643708435 
ProductElongator protein 3/MiaB/NifB 
Protein accessionYP_002566032 
Protein GI222479795 
COG category[R] General function prediction only 
COG ID[COG1244] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01210] conserved hypothetical protein TIGR01210 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CGAGCCCCGA CGCGTACGAG CAGGGGCGCG GGATGGACGC GCACAACGCC 
GTGATGCGCG ACATCCGCGC CGAGCGCTCG GAGACGTACG ACCCGACCCA GCCCACCCGG
GTGTGGATCG ACGAGGACAA CACGCCCGAC GGGGTGGTGA ACTCGCTCAC GATCATCCTC
AACACCGGCG GGTGCCGCTG GGCCCGCGCC GGCGGCTGCA CGATGTGCGG CTACGTCGCC
GAGTCCGTGG AGGGCGGCAG CGTCGCCCAC GAGGACCTGA TGAACCAGAT CGAGGTCTGT
CTCGATCACG AGACCGAGAA CGCGGATGCC CCCGCCGAGC TGATCAAGAT CTACACCTCC
GGCTCGTTCC TCGACGAGAG GGAGGTTCCC GCGGAGACCC GGCAAGCGAT CGCGGAGACG
TTCGCGGACC GGAACCGGAT CGTCGTCGAG TCGCTGCCGG ACTTCGTGAG TCAGGAGAAG
ATCGGCGACT TCGCCGACCA CGGGATCGCG ACCGACGTGG CGGTCGGGCT GGAGACCGCG
ACCGACCGCG TCCGCCACGA CTGCGTGAAC AAGTACTTCG ACTTTTCCGA CTTCGAGGAC
GCCTGCGCGG AGGCGGCCGC GGCCGACGAC ACCTTCGACG CCGACGTGGG GATCAAGGCG
TACCTCCTGA TGAAGCCGCC CTTCCTCGCG GAGCCCGAAG CCGCCGCCGA CATGATCGAC
TCCATCCGTC GGTGTGGCGA CGTGGACGGG TGTCACACCG TCTCGATGAA CCCGACGAAC
GTCCAGCGCT ACACGATGGT CGACGAGCTG TTCTTCAAGG GCGGCTACCG CCCGCCGTGG
CTCTGGTCGG TCGCGCACGT CCTCAAAGAA ACCGCCGATG TCGACGCCAT CGTCGTCTCC
GACCCGGTCG GGCACGGCTC CGATCGCGGC GCGCACAACT GCGGCGAGTG CGATGACCGC
GTCCAGACCG CGATCAAGGA TTTCGACAAG CGACAGGATC CGAGCGTCTT CGAGCAGGTG
TCCTGCGAGT GCGAGGCGAC GTGGGAGCTA GTGATGGACG AGGAGACGAG CTACAACATG
CCGCTCGCTC GATAG
 
Protein sequence
MSTPSPDAYE QGRGMDAHNA VMRDIRAERS ETYDPTQPTR VWIDEDNTPD GVVNSLTIIL 
NTGGCRWARA GGCTMCGYVA ESVEGGSVAH EDLMNQIEVC LDHETENADA PAELIKIYTS
GSFLDEREVP AETRQAIAET FADRNRIVVE SLPDFVSQEK IGDFADHGIA TDVAVGLETA
TDRVRHDCVN KYFDFSDFED ACAEAAAADD TFDADVGIKA YLLMKPPFLA EPEAAADMID
SIRRCGDVDG CHTVSMNPTN VQRYTMVDEL FFKGGYRPPW LWSVAHVLKE TADVDAIVVS
DPVGHGSDRG AHNCGECDDR VQTAIKDFDK RQDPSVFEQV SCECEATWEL VMDEETSYNM
PLAR