| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1346 |
|---|
| Symbol | |
|---|
| ID | 7399441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1360663 |
|---|
| End bp | 1361721 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643708410 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002566008 |
|---|
| Protein GI | 222479771 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.427339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCCG AGCGGAACGA CGCCCCGTCG CGGACCGATC GGTGTCGCGA GTGCGATCGG
GCGGTCACGC CCGGCGCGAA CTTCTGTCCG GGCTGTGGCG CCGACCTGCG CGCCGCGGAA
TCGCGGGACG ACGCCTCAGC CGCCTACTGC ACGGAGTGCG GCGAGCCCGT CGCGCCCGCC
GCCGAGTTCT GCGCGAACTG CGGAACGCGG TGCGGGAGGG CCGAGCCCCC GACAGCCGGC
CCCCCTGATC CCACCGCCGA CTCCGACGCC CGACGCGAGT TCCGCGTCCG AGTACGAGAC
CACCTCGACG ACGGCTGGGA GCTCACCGAG GACCACGGCG ACCGGGTCGT GCTTGTCGCC
AGGGACATCG GCTCGATCCC GGCCCACGTC CTCCTCCTCC TGACGACCGG CGGCGTCGGG
AACCTGCTGT ACGGCTGGTA CAACTACGCC GAGCTGGCGG AGACGCGTCG GCTCAGCGTC
TCCGACGGCC CGCTCCCGGA CGGCGAACTG GGGGCGCCCG GCGACGGCGA CCCGCTCGTC
GCCCTCTCCG GCTACCTCTT GGGCGGCATT CTCCTGCTGG TCGGGCTCGG GATCGCCGCC
GTCGCGGTCG GGCAGGGAGC GCGCCTCGGC GCGCTGTTCG GGCTCGCGTT CGCCGCGCTC
GGGCTGGCGT TGTCTCCGCC CGCTGAGCGG CGGCTCGACC GCCGACACGG CCTCTCCCGG
TTCGGCCGAA TCCGCACCGT CGACCACCGG ATCACCCCGT CGACGGAGCG GACCGAGGCG
CCCTGCGTCG TCTGCGGCGA GGCGTTCGAG CGCGGCGTCG TCCGCCGGCG CCGCGACGAG
ACGGTCGTCG CGGGCGTCCC GATTCGGACC CACTCGCTGC GGTGCAACCA CTACTGCGCC
GGCTGCGCCC GCGCGGAGCT GTTCGGCGGC GACGCCGACG AGACGGCGAT CGATCCGGAT
GTCAGCCTCG ACGACTCCGA GTTCGACGAC TCCGAATTCG ACGACTCCGA GTTCGGACGG
GACGAGGAGA CGGAGCGGGA GCGGGAGCGA GAGCGCTGA
|
|---|
| Protein sequence | MPSERNDAPS RTDRCRECDR AVTPGANFCP GCGADLRAAE SRDDASAAYC TECGEPVAPA
AEFCANCGTR CGRAEPPTAG PPDPTADSDA RREFRVRVRD HLDDGWELTE DHGDRVVLVA
RDIGSIPAHV LLLLTTGGVG NLLYGWYNYA ELAETRRLSV SDGPLPDGEL GAPGDGDPLV
ALSGYLLGGI LLLVGLGIAA VAVGQGARLG ALFGLAFAAL GLALSPPAER RLDRRHGLSR
FGRIRTVDHR ITPSTERTEA PCVVCGEAFE RGVVRRRRDE TVVAGVPIRT HSLRCNHYCA
GCARAELFGG DADETAIDPD VSLDDSEFDD SEFDDSEFGR DEETERERER ER
|
|---|
| |