| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1333 |
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| Symbol | |
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| ID | 7399428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1346202 |
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| End bp | 1347668 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643708397 |
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| Product | Cytochrome b/b6 domain protein |
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| Protein accession | YP_002565995 |
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| Protein GI | 222479758 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.706322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGGA TCGACGCCGC GGTCGACCGA GCCGAGTCGG CGTACGACTG GGTCGACTCG
CGGCTGGACC TCGACGACGC GAACGACTTC CTCGGGAAGG CGTTCCCGGC GGAGGATTCG
TTCCTCCTCG GCGAGGTCGC GCTGTTCTGT TTCGGTATCC TCGTCTCGAC CGGAACGTTC
CTCGCGTTCT TCTACGAGCC GAGCACGGCC GCCGTCGAGT ACGGCGGCAG CGTCGCGCAG
TACCAGGGTC AGGAGATGCC GGCCGCGTTC AAAAGCGTCC TCAACATCAC CTACGACGTG
CCGTTCGGGA TGTTCCTGCG GCGCATGCAC CACTGGGCGG CGCACCTGTT CGTCGCGTCG
ATAGCGTTGC ACATGCTCCG CGTGTTCTTC ACCGGGGCGT ACCGCAACCC GCGCGAGCCG
AACTGGCTCG TCGGGACCGG CCTCGCCGGG CTAGCGATGT TCGCCGCGTA CACCGGCTAC
TCGCTCCCGT ACGACGAGTT CGCGAGCACG GCGGTCGGTA TCGGCTACAA CGTCGCCGCC
TCGATCCCGA TCGTCGGCGA CCCGCTCGCG AGCATCGTCT TCGGCGGGCA GTTCCCGACG
AGCGCGACGA TCCCGCGGCT GTTCTTCCTC CACGTCTTCC TCATTCCGGC CGCGATCGCG
GGGCTCATCG CCGTCCACAT GGCCATCCTC GTCCGGCAGA AACACACCGA GGCGCAGCGC
GACGAGGACG TGGCCGCCGC GGGAGGGGGC GGTGGTACCG CGAAGACGGG CGGGAGCGCC
GAGGCGACCG ACGGCGGCGC CCGCCTGATC GACCGCGACG ATGACAGCGT CGTGATCGGG
CTCCCCGCGT TTCCGAACCA AGCCGCGGTG AGCGCGGTCG TGTTCTTCCT CACGATGGCC
GTGCTTTCGC TGCTCGCCGG CCTGCTCCCC GTCCACAACA TCGCCCAGTA CGGGCCGAAC
GACCCGGCGT CGACGCCGTC GCTCGTCATG CCGGACTGGT TCCTGATGTG GGGGTACGGA
TTCTTGAAGC TCACCCCCTC GTGGATGAGT TTCGACGTGC TTGGCGTGCA CATTAGCTCG
GAGTTCGTGG GCGGGCTGTT CCTCCCGAGT CTCGTGTTCG TCGCCGTGGC GGTCTGGCCG
TTCATCGACC GCGCGGAGAA GCCGGAACAC TTCACCCGGA ACTATCTCGA CCGGCCGTTC
CCGACCGCGG TCGGCATCCT CGGCGTCACG CTCGTCATGG TCGCCTCCAT CGCCGGGATG
GACGTGATCG TCGCCGAGAT TCTCGGCACG TCGACGGCCG TGCTCCGGCC GTACCTGATC
GCGGCGCTCG TGCTCGTCCC CGCCGCGGCC GGCACGCTCA CCTACGCGAT CCTCGGCGGC
TTCGAGGACG GTTCGGGGGC GGGCGGCGAG GAGGCGACGA CAGACGATCG ACCGTCGTCG
GCCACGGAGG GATCGAGCGA TGACTGA
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| Protein sequence | MSRIDAAVDR AESAYDWVDS RLDLDDANDF LGKAFPAEDS FLLGEVALFC FGILVSTGTF
LAFFYEPSTA AVEYGGSVAQ YQGQEMPAAF KSVLNITYDV PFGMFLRRMH HWAAHLFVAS
IALHMLRVFF TGAYRNPREP NWLVGTGLAG LAMFAAYTGY SLPYDEFAST AVGIGYNVAA
SIPIVGDPLA SIVFGGQFPT SATIPRLFFL HVFLIPAAIA GLIAVHMAIL VRQKHTEAQR
DEDVAAAGGG GGTAKTGGSA EATDGGARLI DRDDDSVVIG LPAFPNQAAV SAVVFFLTMA
VLSLLAGLLP VHNIAQYGPN DPASTPSLVM PDWFLMWGYG FLKLTPSWMS FDVLGVHISS
EFVGGLFLPS LVFVAVAVWP FIDRAEKPEH FTRNYLDRPF PTAVGILGVT LVMVASIAGM
DVIVAEILGT STAVLRPYLI AALVLVPAAA GTLTYAILGG FEDGSGAGGE EATTDDRPSS
ATEGSSDD
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