| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1314 |
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| Symbol | |
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| ID | 7399409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1325530 |
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| End bp | 1327986 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643708378 |
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| Product | DNA topoisomerase VI subunit B |
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| Protein accession | YP_002565976 |
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| Protein GI | 222479739 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1389] DNA topoisomerase VI, subunit B |
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| TIGRFAM ID | [TIGR01052] DNA topoisomerase VI, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0353052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCT TCCAGTCGAC GATCGGCGAC GAGGAGGGGA TCGCGGAGGA GCTGGCCGAG
GGCCAGCGCG AGATCTCCAT CGCCGAGTTC TTCGAGAAGA ACAAACACAT GCTCGGGTTC
GACTCGGGCG CCCGCGGGCT CGTCACCGCC GTCAAGGAGG CGGTCGACAA CGCCCTCGAC
GCGACCGAGG AGGCCGGCGT CCTCCCCGAC ATCTACATCG AGATCGAGGA GGTGGGCGAC
TACTACCGGC TCGTGATCGA GGACAACGGG CCGGGCATCA CGAAAGAACA GCTCCCGAAA
GTGTTCGGGA AGCTCCTGTA CGGGAGTCGT TTCCACGCCC GCGAGCAGTC TCGCGGTCAA
CAGGGAATCG GGATTTCGGC GGCCGTGCTG TACTCGCAGC TCACGTCCGG CCAGCCCGCG
AAGATCACCT CGCGCCCCAA GGGGCAGTCC CGGGCGCAGT ACTTCGAGCT GATCATCGAC
ACCGACACGA ACGAGCCGGA GATCAAGGCG GACGAGGAGA CGACGTGGGA CCGCCCCCAC
GGCACCCGCA TCGAACTGGA GATGGAGGCG AACATGCGCG CCCGCAACCA GCTCCACGAC
TACGTGAAAC ACACCGCGGT CGTCAACCCC CACGCGCGGT TCGAGCTGCG CGAGCCGGGA
CTCGACGAGC CGCTGAAGTT CGAGCGCGCG ACCGACGAGC TGCCGGCCGA GACCGAGGAG
ATTCGCCCGC ACCCCCACGG CGTCGAGCTG GGCGCGCTGA TCAAGATGCT GGAGGCGACC
GAGTCGTACT CCGTCTCCGG ATTCCTCCAG GAGGAGTTCA CGCGAGTCGG CAAGAAGACC
GCCGACAGCG TCATCGACAA CTTTCGCGAC GTGTACTACG GTCGCGAACT CGCGTGGTCG
CCCCCGCGCG CCCACGACGA TCGCGACGTC GCGGCCGCGG TCGCGGGCGC GGTCGCCAAC
AAGGGCAAGG CGGCGACGAC CGACTTCGCC GACGGCATCG CCGAGACGGT CGCAGGCAAC
GACCGGCTCT CCCGGTCCGA GCTCGCGACG ATCGTCGACA ACGTCGCGGA GACCGTCGAG
GACGACACCG GCAAGACCTT CGGCGGGACC GTCCGCGAGA ACGCGGTCGA CGCCGCGTGG
CAGGCGATTT CCGGCGCCGG AGATGACGAC GGAGCGGGCG ACAGCGAGGA CGGCGAGAAC
GTCGATCCGA GCGAGTCGTC ACTCGTCGCC GACGCCTACG CCTTAGTCGA CGACGCCACC
TCGACCCGGA AGGACGACGC CGCGGTGCGG GCGATGGCCG AAGCGCTCGC GCGCCGGTTC
GAGAACCTCG ACGGCGACGC GTTCCGGATC ACTCGCGACG ACCTCGAACG CCTCGTCGCG
GACGCCGCCT CGTTCGTCAC CGAGCAGCAC GACGTGACGT TCGGCGAGAC TGCCCGCGAG
AACGTCGTCG AGACGTTCTG GTCGCGGGCG CGAACGGTCC CGGACGACCC CCCGAAAGTA
ACGGCGATCG CGGGCGACCG CGACGCCTCG GCCGACCTGC TCGAAGCGAT GCGGACGACC
GACATTCTCG CACCGCCGAC CGACTGCCTC GCGCCGATCA CGGCCGAGCT GGTCGAAGCC
GGGCTTCGGA AGGAGTACGA CGCTGACTTC TACGCGGCCG CGACCCGCGA TGCCGAGGTC
CACGGCGGCG ACCCGTTCAT CGTCGAGGCC GGCATCGCCT ACGGCGGCGA GATCCCGGCG
GAGGGGTCGG TGGAGCTGCT CCGGTTCGCG AACCGCGTCC CGCTCGTGTA CCAGCGTGGC
GCCTGCGCGA CGACGGACGT GATCAAGTCG ATCGGGTGGC GCAACTACGG GCTCGATCAA
CCCGGCGGGT CGGGGCTGCC CAACGGCCCG GCCGTCATCA GCATCCACAT CGCGTCCACG
AACGTCCCCT TCACGAGCGA GTCGAAGGAC GCACTCGCGA ACGTGCCGGC GATCGAAGAC
GAGATCGAAC TCGCCGTTCG CGAGGCGGCC CGCGAGCTGA AGTCGTACCT CAACAAGCGG
CGCTCGATGC AGCAGCGCCG GGAGAAACAG GACGTGCTCG GCCGGATCCT CCCGGAGATG
GCGGACAAGG TTTCGGAGGT CACGGGCCGG CCGCGCCCCG ACATCGACAG CGCGCTCGCG
CGGATCATGA ACAACGTCAG CGTCGAGCGC GAGGTGAACG ACGAGACGGT GACGCTCGTC
GTCGAGAACC ACTCGGACGT GAACGAGCAG CTGGAGATCA CGGACATCGT CTCGGCGGAG
CCGACAGACC TCTCGGACGG GACGGTGGTG GACATGGACG GCGAGTGGTT CGTCCAGTGG
AAACCCGAGG TACCCTCGGG CGACGAGCGG GAACTGACGT ACGCGATCGA CGGCGACGCA
GACTTCGAGG TCAGCGTCGG CGGCGTCGAA ACGGAGAAAC TCACGGTGAA CGCGTAA
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| Protein sequence | MTSFQSTIGD EEGIAEELAE GQREISIAEF FEKNKHMLGF DSGARGLVTA VKEAVDNALD
ATEEAGVLPD IYIEIEEVGD YYRLVIEDNG PGITKEQLPK VFGKLLYGSR FHAREQSRGQ
QGIGISAAVL YSQLTSGQPA KITSRPKGQS RAQYFELIID TDTNEPEIKA DEETTWDRPH
GTRIELEMEA NMRARNQLHD YVKHTAVVNP HARFELREPG LDEPLKFERA TDELPAETEE
IRPHPHGVEL GALIKMLEAT ESYSVSGFLQ EEFTRVGKKT ADSVIDNFRD VYYGRELAWS
PPRAHDDRDV AAAVAGAVAN KGKAATTDFA DGIAETVAGN DRLSRSELAT IVDNVAETVE
DDTGKTFGGT VRENAVDAAW QAISGAGDDD GAGDSEDGEN VDPSESSLVA DAYALVDDAT
STRKDDAAVR AMAEALARRF ENLDGDAFRI TRDDLERLVA DAASFVTEQH DVTFGETARE
NVVETFWSRA RTVPDDPPKV TAIAGDRDAS ADLLEAMRTT DILAPPTDCL APITAELVEA
GLRKEYDADF YAAATRDAEV HGGDPFIVEA GIAYGGEIPA EGSVELLRFA NRVPLVYQRG
ACATTDVIKS IGWRNYGLDQ PGGSGLPNGP AVISIHIAST NVPFTSESKD ALANVPAIED
EIELAVREAA RELKSYLNKR RSMQQRREKQ DVLGRILPEM ADKVSEVTGR PRPDIDSALA
RIMNNVSVER EVNDETVTLV VENHSDVNEQ LEITDIVSAE PTDLSDGTVV DMDGEWFVQW
KPEVPSGDER ELTYAIDGDA DFEVSVGGVE TEKLTVNA
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