| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1295 |
|---|
| Symbol | |
|---|
| ID | 7399390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1303155 |
|---|
| End bp | 1304438 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643708359 |
|---|
| Product | phosphoribosylamine/glycine ligase |
|---|
| Protein accession | YP_002565957 |
|---|
| Protein GI | 222479720 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
|---|
| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.058661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGA CCGTACTCTT GGTCGGGGGC GGCGGGCGCG AACACGCGAT CGCCCGCGCC
GTCGCCGACG ACTGCGCGCT GTACGCCTGC GCGAGCAACC GAAACCCGGG AATCCGCCGA
CTCGCAGACG GGTTCGAGAC GATCGATGAG ACCGACGCCG AGGCGGTCGC CGACTACGCG
ACCGCGGTCG GCGCTGATCT GGCTGTGATC GGACCGGAAT CCGCGCTCGC GGCGGGCGTC
GCCGACGCGC TCGACGAGGC CGGCGTGTAC GCCTTCGGCC CGCAGGCCGA GGAGGCGCGC
TTAGAGACGG ACAAGGCGTA CCAGCGCGAG TTCATGGACG AGGCCGACAT CCCCGGCTGT
CCGGACTACG CGGTGTTCGA CGACATCGAG GCCGCCTGCG ACCACATCGA CGCGTACGAC
GGCGACCTCG CGGTGAAGCC GGCCGGGCTC ACCGGCGGCA AGGGCGTGAA GGTGATCGGC
GATCAGGTGA CTGCCGAGGA GGCCAAGACG TACCTCCGCG ATTCCGACTA CGACCGGGTC
GTGTTGGAAG AGCGGCTCGT CGGCGAGGAG TTCACGGTGC AGGCGTTCGT CGCGAACGGC
GACCTCCGCA CGACCCCCGC AGTGCAGGAC CACAAGCGCG CCTACGAGGG CGACGAGGGA
CCGAACACCG GCGGGATGGG CTCGTACACC GACACCGGCC TCTCGCTGCC GTTCATGGCC
GAGGGCGACT ACGACGACGC CGTCGACGTG CTGGAGGCAG TCGTCGACGC GCTCCCCGAC
TACAAGGGCG TCCTCTACGG CCAGTTCATG CTCACCGCCG AGGGCCCGAA AGTCGTCGAG
TTCAACGCGC GCTTCGGCGA CCCGGAGGCG ATGAACACGC TCCCGGTCTT GGAGACGCCC
TTCATCGACG TGCTCACGGC CGCGCGTGAC GGAAACGACC TCCCCAAACT CTCCTTCACC
GGCGAGGCGA CGGTCTGTAA GTACGCGGTG CCGGAGGGGT ACCCGACCGA CCCCGACGCG
GGTGCGAAGA TCGCGGTCGA CGAGGAGAGC GTCGGCGACG CGCTCCTCTA CTACGCCAGC
GTCGACGAGC GCGACGACGG GCTCTACACC ACCACCTCTC GGGCGTTCGC GGTCGTCGGT
CGCGGCGACT CCATCGCGGC CGCAGAGGCT GAGGCCGAGG ACGCGCTCGC CGCCGCCGGC
GACCGCGTCC GCATCCGTCA CGACATCGGG ACGGCCGACC TCGTCGAGCG GCGGATCGAG
CACATGGCCG AGATCCGAAA GTAG
|
|---|
| Protein sequence | MTETVLLVGG GGREHAIARA VADDCALYAC ASNRNPGIRR LADGFETIDE TDAEAVADYA
TAVGADLAVI GPESALAAGV ADALDEAGVY AFGPQAEEAR LETDKAYQRE FMDEADIPGC
PDYAVFDDIE AACDHIDAYD GDLAVKPAGL TGGKGVKVIG DQVTAEEAKT YLRDSDYDRV
VLEERLVGEE FTVQAFVANG DLRTTPAVQD HKRAYEGDEG PNTGGMGSYT DTGLSLPFMA
EGDYDDAVDV LEAVVDALPD YKGVLYGQFM LTAEGPKVVE FNARFGDPEA MNTLPVLETP
FIDVLTAARD GNDLPKLSFT GEATVCKYAV PEGYPTDPDA GAKIAVDEES VGDALLYYAS
VDERDDGLYT TTSRAFAVVG RGDSIAAAEA EAEDALAAAG DRVRIRHDIG TADLVERRIE
HMAEIRK
|
|---|
| |