Gene Hlac_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1292 
Symbol 
ID7399387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1301207 
End bp1302022 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID643708356 
ProductSurvival protein SurE 
Protein accessionYP_002565954 
Protein GI222479717 
COG category[R] General function prediction only 
COG ID[COG0496] Predicted acid phosphatase 
TIGRFAM ID[TIGR00087] 5'/3'-nucleotidase SurE 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG AGCGCGTCCT GTTGACGAAC GACGACGGGA TCGACGCCGT CGGACTTAGA 
GCGCTCTACG ACGGGCTTTC GGCCGACTAC GACGTGGTGA CGGTCGCACC GACCGGCGAC
CGATCGTCGG CCGGGCGCGC GCTCTCGGAC GGCGTCGATA TCGCGGACCA CGAGCTCGGC
TACGCCGTCG ACGGCACTCC GGTCGACTGC GTCGTCGCGG GGCTCGACGC GCTGGTCCCG
GACGCCGACG TCGTGGTCGC GGGCTGTAAC AAGGGGGCGA ACCTCGGCGC GTACACGCTC
GGGCGATCCG GGACCGTCTC CGCCGCGGTC GAGGCGGCCT TCTTCGACGT GCCCGCGGTG
GCGACCTCGA TGTACGTCCC GGGCGGGGAA GACTGGTGGA AGCGGAAGCT GGAGCCGGCG
GAGTTCGCGA ACGCGACCCG CGCGACCCGG TACCTCGTCG CGGAGGCGAC CGCGTCGGGG
GCGTTCGACC GCGCCGACTA CCTCAACGTT AACGCCCCGA TCGCGAATCC GGACGGAGAG
CGCGACACCC CAGCGCCGAT GCGCGTCACC GCGCCCTCGA CATGGTACGG GATGGAGGCG
GCACACGACG GAAACGGTCG CGTGAGCTTC TCCGACCCGA TCTGGGGAAA AATGAACGAG
GGCGATGTGC CCGACTCGGT CGGCACCGAT CGCCGGGCGG TCATCGATGG GGAAGTCTCC
GTCTCCCCGC TGTCGGTGCC GCACGCGGCC GAGCCAGACG CGGGGCTCGA CGAGCTGGCG
GCGGCGTACG GACGCGTGAC CGAGAACGTT CGATGA
 
Protein sequence
MSVERVLLTN DDGIDAVGLR ALYDGLSADY DVVTVAPTGD RSSAGRALSD GVDIADHELG 
YAVDGTPVDC VVAGLDALVP DADVVVAGCN KGANLGAYTL GRSGTVSAAV EAAFFDVPAV
ATSMYVPGGE DWWKRKLEPA EFANATRATR YLVAEATASG AFDRADYLNV NAPIANPDGE
RDTPAPMRVT APSTWYGMEA AHDGNGRVSF SDPIWGKMNE GDVPDSVGTD RRAVIDGEVS
VSPLSVPHAA EPDAGLDELA AAYGRVTENV R