Gene Hlac_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1284 
Symbol 
ID7399379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1294238 
End bp1294696 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content66% 
IMG OID643708348 
Productaspartate carbamoyltransferase regulatory subunit 
Protein accessionYP_002565946 
Protein GI222479709 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1781] Aspartate carbamoyltransferase, regulatory subunit 
TIGRFAM ID[TIGR00240] aspartate carbamoyltransferase, regulatory subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC ACGAGCTGCG CGTCTCGAAG ATCCGCGACG GCACCGTGAT CGACCACGTC 
GAGGGCGGGC AGGCGCTCAA CGTACTCGCG ATCTTGGGCA TCGACGGCTC CGAGGGGTAC
GGCGTCTCGG TCGGGATGAA CGTCCCCTCG GACCGACTCG GCCGCAAGGA CATCGTGAAG
GTGGAGGAAC GGGAACTTTC GCAGTCGGAG GTCGACGTGC TCTCGCTGAT CGCGCCCGAG
GCGACGATCA ACATCGTCCG CGACTTCGAG GTGGTCGAGA AGAACCGCGT CACCCGCCCC
GACAGCGTAA CTGGCGTGCT CTCGTGTCCG AACCGCAACT GCATCACGAA CGCCGGCGAG
CCGATCGACA CCCGGTTCGA CGTGGTCGCC GACGGCGTCC GCTGCGACTA CTGCTCGACG
ATCCTCCGGA GCGACATCGC CGACTACATC GACGTCTGA
 
Protein sequence
MSDHELRVSK IRDGTVIDHV EGGQALNVLA ILGIDGSEGY GVSVGMNVPS DRLGRKDIVK 
VEERELSQSE VDVLSLIAPE ATINIVRDFE VVEKNRVTRP DSVTGVLSCP NRNCITNAGE
PIDTRFDVVA DGVRCDYCST ILRSDIADYI DV