68 homologs were found in PanDaTox collection
for query gene Hlac_1284 on replicon NC_012029
Organism: Halorubrum lacusprofundi ATCC 49239



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012029  Hlac_1284  aspartate carbamoyltransferase regulatory subunit  100 
 
 
152 aa  302  1.0000000000000001e-81  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_013743  Htur_1663  aspartate carbamoyltransferase, regulatory subunit  78.08 
 
 
161 aa  226  6e-59  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_3466  aspartate carbamoyltransferase, regulatory subunit  76 
 
 
163 aa  226  1e-58  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2302  aspartate carbamoyltransferase regulatory subunit  73.65 
 
 
154 aa  222  1e-57  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.162343  normal 
 
 
-
 
NC_013158  Huta_0521  aspartate carbamoyltransferase regulatory subunit  71.14 
 
 
152 aa  218  3e-56  Halorhabdus utahensis DSM 12940  Archaea  normal  0.646592  n/a   
 
 
-
 
NC_011832  Mpal_2537  aspartate carbamoyltransferase regulatory subunit  51.03 
 
 
155 aa  159  9e-39  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_008553  Mthe_1257  aspartate carbamoyltransferase regulatory subunit  54.9 
 
 
154 aa  159  1e-38  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008698  Tpen_1158  aspartate carbamoyltransferase regulatory subunit  55.33 
 
 
159 aa  157  7e-38  Thermofilum pendens Hrk 5  Archaea  normal  0.0373635  n/a   
 
 
-
 
NC_009051  Memar_1690  aspartate carbamoyltransferase regulatory subunit  51.72 
 
 
155 aa  157  7e-38  Methanoculleus marisnigri JR1  Archaea  normal  0.483378  n/a   
 
 
-
 
NC_009712  Mboo_1836  aspartate carbamoyltransferase regulatory subunit  51.35 
 
 
165 aa  151  2.9999999999999998e-36  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.228853  normal 
 
 
-
 
NC_008942  Mlab_0793  aspartate carbamoyltransferase regulatory subunit  51.03 
 
 
155 aa  147  7e-35  Methanocorpusculum labreanum Z  Archaea  normal  0.424417  hitchhiker  0.000000623448 
 
 
-
 
CP001800  Ssol_1677  aspartate carbamoyltransferase, regulatory subunit  49.31 
 
 
159 aa  144  5e-34  Sulfolobus solfataricus 98/2  Archaea  normal  0.712682  n/a   
 
 
-
 
NC_009440  Msed_1963  aspartate carbamoyltransferase regulatory subunit  50.35 
 
 
158 aa  143  8.000000000000001e-34  Metallosphaera sedula DSM 5348  Archaea  normal  normal  0.811384 
 
 
-
 
NC_007955  Mbur_0066  aspartate carbamoyltransferase regulatory subunit  50.67 
 
 
159 aa  143  8.000000000000001e-34  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008701  Pisl_0505  aspartate carbamoyltransferase regulatory subunit  50.7 
 
 
171 aa  140  9e-33  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal  0.219397 
 
 
-
 
NC_007796  Mhun_0619  aspartate carbamoyltransferase regulatory subunit  50.74 
 
 
155 aa  139  9.999999999999999e-33  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.385916 
 
 
-
 
NC_007355  Mbar_A1167  aspartate carbamoyltransferase regulatory subunit  47.65 
 
 
156 aa  139  9.999999999999999e-33  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009376  Pars_1694  aspartate carbamoyltransferase regulatory subunit  52.86 
 
 
151 aa  138  1.9999999999999998e-32  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.341043  normal 
 
 
-
 
NC_010525  Tneu_1588  aspartate carbamoyltransferase regulatory subunit  52.86 
 
 
151 aa  136  7.999999999999999e-32  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_009073  Pcal_1776  aspartate carbamoyltransferase regulatory subunit  50 
 
 
151 aa  132  1.9999999999999998e-30  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    decreased coverage  0.0000000334817 
 
 
-
 
NC_013926  Aboo_1120  aspartate carbamoyltransferase, regulatory subunit  45.39 
 
 
154 aa  131  3e-30  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.00691947  n/a   
 
 
-
 
NC_010085  Nmar_1687  aspartate carbamoyltransferase regulatory subunit  42.07 
 
 
153 aa  131  3.9999999999999996e-30  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.441671 
 
 
-
 
NC_009954  Cmaq_0566  aspartate carbamoyltransferase regulatory subunit  46.98 
 
 
163 aa  127  4.0000000000000003e-29  Caldivirga maquilingensis IC-167  Archaea  normal  normal  0.0147678 
 
 
-
 
NC_011312  VSAL_I0518  aspartate carbamoyltransferase regulatory subunit  39.04 
 
 
154 aa  122  1e-27  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0356  aspartate carbamoyltransferase regulatory subunit  41.38 
 
 
148 aa  115  1.9999999999999998e-25  Methanococcus maripaludis C7  Archaea  normal  hitchhiker  0.00169801 
 
 
-
 
NC_009135  MmarC5_0480  aspartate carbamoyltransferase regulatory subunit  40.69 
 
 
148 aa  115  1.9999999999999998e-25  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1159  aspartate carbamoyltransferase regulatory subunit  35.06 
 
 
155 aa  115  1.9999999999999998e-25  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0499  aspartate carbamoyltransferase regulatory subunit  36.17 
 
 
155 aa  114  3e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0435  aspartate carbamoyltransferase regulatory subunit  36.17 
 
 
154 aa  114  3.9999999999999997e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0419  aspartate carbamoyltransferase regulatory subunit  38.57 
 
 
154 aa  114  6e-25  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0366  aspartate carbamoyltransferase regulatory subunit  38.57 
 
 
154 aa  113  7.999999999999999e-25  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1563  aspartate carbamoyltransferase regulatory subunit  40.69 
 
 
148 aa  113  7.999999999999999e-25  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0429  aspartate carbamoyltransferase regulatory subunit  42.07 
 
 
148 aa  113  1.0000000000000001e-24  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4817  aspartate carbamoyltransferase regulatory subunit  38.57 
 
 
153 aa  112  2.0000000000000002e-24  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3750  aspartate carbamoyltransferase, regulatory subunit  38.57 
 
 
153 aa  112  2.0000000000000002e-24  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04076  hypothetical protein  38.57 
 
 
153 aa  112  2.0000000000000002e-24  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5766  aspartate carbamoyltransferase regulatory subunit  38.57 
 
 
153 aa  112  2.0000000000000002e-24  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E4839  aspartate carbamoyltransferase regulatory subunit  38.57 
 
 
153 aa  112  2.0000000000000002e-24  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4725  aspartate carbamoyltransferase regulatory subunit  38.57 
 
 
153 aa  112  2.0000000000000002e-24  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3767  aspartate carbamoyltransferase regulatory subunit  38.57 
 
 
153 aa  112  2.0000000000000002e-24  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_04112  aspartate carbamoyltransferase regulatory subunit  38.57 
 
 
153 aa  112  2.0000000000000002e-24  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4500  aspartate carbamoyltransferase regulatory subunit  38.57 
 
 
153 aa  112  2.0000000000000002e-24  Escherichia coli HS  Bacteria  normal  0.848826  n/a   
 
 
-
 
NC_009832  Spro_0544  aspartate carbamoyltransferase regulatory subunit  37.86 
 
 
154 aa  112  3e-24  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3736  aspartate carbamoyltransferase regulatory subunit  36.43 
 
 
154 aa  111  3e-24  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG0358  aspartate carbamoyltransferase regulatory subunit  38.51 
 
 
151 aa  110  5e-24  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.113666 
 
 
-
 
NC_009457  VC0395_A2093  aspartate carbamoyltransferase regulatory subunit  33.77 
 
 
155 aa  110  6e-24  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03648  aspartate carbamoyltransferase regulatory subunit  35.62 
 
 
153 aa  110  7.000000000000001e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_2667  aspartate carbamoyltransferase, regulatory subunit  41.96 
 
 
149 aa  110  9e-24  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0446  aspartate carbamoyltransferase regulatory subunit  38.57 
 
 
153 aa  110  1.0000000000000001e-23  Enterobacter sp. 638  Bacteria  normal  normal  0.012837 
 
 
-
 
NC_012880  Dd703_3571  aspartate carbamoyltransferase regulatory subunit  35.71 
 
 
154 aa  109  1.0000000000000001e-23  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3295  aspartate carbamoyltransferase regulatory subunit  37.96 
 
 
151 aa  108  2.0000000000000002e-23  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.14136 
 
 
-
 
NC_011080  SNSL254_A4806  aspartate carbamoyltransferase regulatory subunit  36.43 
 
 
153 aa  109  2.0000000000000002e-23  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4862  aspartate carbamoyltransferase regulatory subunit  36.43 
 
 
153 aa  109  2.0000000000000002e-23  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B4743  aspartate carbamoyltransferase regulatory subunit  36.43 
 
 
153 aa  109  2.0000000000000002e-23  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A4841  aspartate carbamoyltransferase regulatory subunit  36.43 
 
 
153 aa  108  3e-23  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4712  aspartate carbamoyltransferase regulatory subunit  36.43 
 
 
153 aa  107  4.0000000000000004e-23  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.110396  normal  0.30816 
 
 
-
 
NC_013456  VEA_002418  aspartate carbamoyltransferase regulatory chain PyrI  34.25 
 
 
153 aa  107  5e-23  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007984  BCI_0259  aspartate carbamoyltransferase regulatory subunit  32.17 
 
 
156 aa  102  2e-21  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0042  aspartate carbamoyltransferase regulatory subunit  44.37 
 
 
155 aa  101  3e-21  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010816  BLD_0533  aspartate carbamoyltransferase regulatory subunit  38.24 
 
 
139 aa  93.2  1e-18  Bifidobacterium longum DJO10A  Bacteria  normal  0.813179  n/a   
 
 
-
 
NC_010001  Cphy_2751  aspartate carbamoyltransferase regulatory subunit  31.47 
 
 
143 aa  83.2  0.000000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0781  aspartate carbamoyltransferase regulatory subunit  31.65 
 
 
142 aa  82  0.000000000000003  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0223  bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit  31.08 
 
 
524 aa  70.5  0.000000000008  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1149  bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit  30.87 
 
 
527 aa  69.3  0.00000000002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1306  bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit  32.21 
 
 
527 aa  69.3  0.00000000002  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1193  bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit  31.54 
 
 
522 aa  67.4  0.00000000006  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0977  bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit  29.3 
 
 
525 aa  64.3  0.0000000006  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0129  bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit  24.68 
 
 
535 aa  45.4  0.0003  Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.00714035  n/a   
 
 
-
 
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