| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1273 |
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| Symbol | trpA |
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| ID | 7399368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1283749 |
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| End bp | 1284663 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643708337 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_002565935 |
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| Protein GI | 222479698 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGACC GGACCGCGGA ATCGGCGAAG ACGGGCAACT CCGAGGCCAT CGCGGCCGCC
TTCGCCGACG GCCCCGCCTA CATCCCGTAC CTCGCGGTCG GCGATCCGGA CTACGAGTCC
TCGAAGGCGT ACGTCGAGGC GCTCGACCGC GGCGGCGCGG ACATCATCGA ACTCGGACTC
CCGTTCTCGG AGCCGATCGC GGAGGGGTCG ACCATTCAGG GGGCGCTGGT CCGCGCGCTC
GACGCCGGGA TGACGCCGGA CCGGTTCTTC GCGTTCGCGG AGGAGGTGGA CGTTGAGGCG
CCGCTCGTCT GCATGACGTA CTACAACCTC ATTTACCAAT ACGGCGGCGA GGCGCGGAGC
GCCTCGGATG CGAGCGGTGA AACCGCGAGC GCCGGCCCCC GTCCCTTCGT CGAGCGCGCC
GCTGCGGCCG GCATCGAAGG GCTCGTCGTC CCCGACCTCC CGGCCGAGGA GGCCGACCCC
CTGCGAGAGG CGTGCGACGA GTTCGGGCTC GACTTGGTCT TCATCGTCGC GCCCACCACG
GTCGACGACC GGCTCGATCG GATCATGGAC AGGGTGTCCG GCTACGTCTA CGTGCAGGCG
CGCCTCGGGA CCACCGGCGC GCGCAGCGAC GTGTCCGACC AGACCACGCA GAGCTTAGAT
CGGCTCCGTG AGTACGACGT GCCGAAGGCC GTCGGGTTCG GCATCTCATC GGGCGAGCAC
GCGGAGCGCA TCGTGGGCGG CGGCGCCGAC GGGATCATCG TCGGCTCGGC GCTCGTCGAC
ATCGTCGCCG AGGGCGTCGA GGACGACCTC TCGACCGCCG AGGTCGCCGA CCGGCTGGAG
GCGCTCTCAC GGGAACTGAA GGCGGGCGCC GAACGCGGCT ACGCCGCGCG CATCGAGGCG
GCGGAGTCGC GGTGA
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| Protein sequence | MADRTAESAK TGNSEAIAAA FADGPAYIPY LAVGDPDYES SKAYVEALDR GGADIIELGL
PFSEPIAEGS TIQGALVRAL DAGMTPDRFF AFAEEVDVEA PLVCMTYYNL IYQYGGEARS
ASDASGETAS AGPRPFVERA AAAGIEGLVV PDLPAEEADP LREACDEFGL DLVFIVAPTT
VDDRLDRIMD RVSGYVYVQA RLGTTGARSD VSDQTTQSLD RLREYDVPKA VGFGISSGEH
AERIVGGGAD GIIVGSALVD IVAEGVEDDL STAEVADRLE ALSRELKAGA ERGYAARIEA
AESR
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