Gene Hlac_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1254 
Symbol 
ID7399522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand+ 
Start bp1266243 
End bp1266857 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID643708318 
Productcytidylate kinase 
Protein accessionYP_002565916 
Protein GI222479679 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1102] Cytidylate kinase 
TIGRFAM ID[TIGR02173] cytidylate kinase, putative 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.339861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGAA CCTCGGTGGC GGCAGAACGG GAGATCGACC GAAACCTCTT CGTCACCGTC 
TCGGGGCCGC CGGGCTGCGG CGCGACGACG CTGGTGGAGG GGATCGCGGC CGCACTCGAC 
TGCGGCTACG TCTCCGGCGG CGAGCTGTTC CGCGAGATCG CCGCCGAGCG CGACATGAGC 
CTCTCGCAGT TGATCGCGAA GGCCGGCGAG TCCGAGGAGA TCGACCGTGC GCTGGACAAG 
CGGCTCCGTC GGATCGCCGA GAAGTGGGGG GCCGCGAACA AGGCCTTCGT CCTCGAATCG 
CGGCTCGCCG GCTGGATCGC CGGCAACCGC GCCGACATCC GGATCTGGCT CGACGCGCCC 
GACGGGGTGC GCGCCGACCG TACCCTCGAC CGCGAAGAGA TGACCTCGGA GATGCAGGTC 
CGCGAGGTGA TCGAAGAGCA GCGCTACCAG TCGTACTACG GGATCGATCT GTCCGACCGC 
TCCATCTACG ATCTGGCGAT CAACACCGGT CGCTGGAACA CCGAGGCGAC GCTGGACCTG 
GCGCTCACGG CGATCGAGGG GTACGACGTG GAGTCCGACG AGGGGGCGTT CGACACGCCC 
GACTTCGAGA TCTAG
 
Protein sequence
MSGTSVAAER EIDRNLFVTV SGPPGCGATT LVEGIAAALD CGYVSGGELF REIAAERDMS 
LSQLIAKAGE SEEIDRALDK RLRRIAEKWG AANKAFVLES RLAGWIAGNR ADIRIWLDAP 
DGVRADRTLD REEMTSEMQV REVIEEQRYQ SYYGIDLSDR SIYDLAINTG RWNTEATLDL 
ALTAIEGYDV ESDEGAFDTP DFEI