| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1216 |
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| Symbol | |
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| ID | 7399484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1226737 |
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| End bp | 1227771 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643708281 |
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| Product | integrase family protein |
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| Protein accession | YP_002565879 |
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| Protein GI | 222479642 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000753673 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGCA CGCGAGCCCC CGACGAGGTC GACGACCCGA TCGGATACTT CATCGAGGAC
CTCACCTACC ACGGGAAGAC CGAACGAACT CGCGACTCCT ACGAGCGTGT GCTCCGCCGG
TTCGAGTCGT TTCTCGATCA CGACATGACG CCGGCGTCGG CTACCCACCG CGACTGCATG
GCGTTCGTCC ACTCGCTTCG CGGCGACGCG GCCGATAGCA CGGTGGCGAC GTACGCGGCG
TATCTCCACC GGTTCTACGG GTATATGACT GAAGTCGGTG TCTTTGAGGG GAACCCGATG
ACGCTCGTGA TGGAAGAGAT GGACGAGACG GTCGATAAGG ACCCGGCGCG GCGAGATGTT
TCGATCCCCG CGATGCGCGA ATTTGTCGCC GGTATTCGGC ATCCGCTCCA CCGCGCGCTC
GTCGTCGCGC TGTTGAAGAC CGGAATGCGG GTGGGTGAGC TCTGTAACCT CGATCTCCGC
GATCTCGCGA TCGACGACGA GGAGGTCAGG GAGACGTTCG CACTGGGAAC GCGACCGGCC
CTCGCGGACC GGCCGAACTC GCTGTACGTC ACACCGGACG CGACGGTGGG CGAGGAGCTG
AACGGGGAGG CCCGTACCGC GTCGAACAAG CGCAAGCGCG CCACCGTGAT CCCTATCGAC
GACGAGTTGA TGGGGACGCT GAAACGGTGG CTTGCGGTGC GCCCGGACGG TCCCTCCTCG
GCGGATCCAC TGTTCGTCGG CACCGCGGAG GGATGGGGCG AGCGGCTTGA CCCGCAAGCG
GTCAGACACG TTGTCGAACG ATACGCCCGC GAGGCGGGGT GGTACCGTAC GGGTGGCGGT
GCCGCCGAGA ACGTCACGCC CCACTACTTC CGGCACTTCT TCACGACGCA TCTCCGGGAC
CGGACGGGCG ATCGCGGCGT CGTCAAGTAC CTACGCGGTG ATGTCGCCGA CGACGTAATC
GACACGTACA CCCACAACTG GGGTGATCAG GTCCGCGAGA CGTACGAAGC GAACGTGTAC
CAGCTGTTGA GGTAG
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| Protein sequence | MSSTRAPDEV DDPIGYFIED LTYHGKTERT RDSYERVLRR FESFLDHDMT PASATHRDCM
AFVHSLRGDA ADSTVATYAA YLHRFYGYMT EVGVFEGNPM TLVMEEMDET VDKDPARRDV
SIPAMREFVA GIRHPLHRAL VVALLKTGMR VGELCNLDLR DLAIDDEEVR ETFALGTRPA
LADRPNSLYV TPDATVGEEL NGEARTASNK RKRATVIPID DELMGTLKRW LAVRPDGPSS
ADPLFVGTAE GWGERLDPQA VRHVVERYAR EAGWYRTGGG AAENVTPHYF RHFFTTHLRD
RTGDRGVVKY LRGDVADDVI DTYTHNWGDQ VRETYEANVY QLLR
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