Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1160 |
Symbol | |
ID | 7400969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1165611 |
End bp | 1167002 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643708225 |
Product | hypothetical protein |
Protein accession | YP_002565824 |
Protein GI | 222479587 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.300381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGGCG TTCCCGGTGA TCTCACGACC TCGACGCGCC CGCCGACCAC GATCCCGCTT CGCCACTTCC TCGTCGCGTT GGCGTTTCTC GTCGCTGGCG GAGCCCTCGC GCTCCTCCGC GTTGCGGGGC TGGCGGGAAC GGGTCCCGGC CTCGACGGGA TCGCAGTCGC GCACCTGCTC CTCGTGGGGT GGGTGTGTCT CACGATTATC GGCGCGATGA CGCAGTTCGT CCCCGTCTGG TCGGGCGTCG AGATCCACTC CGAGCGGCTG GCGACGCTCC AGTTGGTCGC CGTCGCGGTC GGCGTGGCCG GGTTCGCCAC GGGGCTCTGG CTCGGGCGGC TGGCCGACGC CGCCCTCATG GCGGGCGTCA TGGTCGTCGG GATCGCCGTC TTCGCGTACA ACCTCGCCCG GACGCTGTGG CGCGCGCGTC CCTTCGACAC CACCGAGACG CACTTCGCGC TGGCGGTCGG CTTCCTCGCG CTCGCGGCCG TCTTCGGGGG GACCCTCGCC GCGGACTACC GATGGGGCGT GCTCGTCGGG ACCGGGCTCT CGCGGGCCGC GGTCGTCGAC GCCCACGTCA CGCTGGCGGT CCTCGGCGCC GTGGTGACGA CCGTGATCGG GGCGCTGTAC CAGCTCGGCC CCATGTTCAC GCAGACCGAC GCGCTCTCGG TCGAAACGCG CGCGGCGCGG ATCGAAACCG CGGCGTACCC GGTCGGCGTC CTCGCGCTCG CGGCCGGGCG GCTGGTCGAG CAGTCGGTCG TCGCTACCCT CGGCGGGCTG CTCGTCGCCG GCGGCGTGGC GGTCGCCGGC GCGGTCCTCC TCCGTCGAAT TCGGGACGCG ACCGGGGCGG CGACCCCGAT GCTCTCGCGG TACGCGGTCG TCGGCGTCGC GACCCTCGCG TGGAGCGCGA CCGCGCTCGC GACGTGGATC CGGACTCCGC TCGGCGCGGG CGTCAGGTTC GGTCACCCCG CGACCGGTCC CGTCCTGCTC GGCGCGCTCG TGGGGTTCGT CGTGGTCGGG AGCCTCTACC ACGTCGTCCC CTTCATCGTC TGGCTCGACC GGTACGCCGA CCGGGTCGGA CTGGAGCGCG TGCCCGCGAT CGACGACCTC TACGACGCCC GGGTCGCGAC GGTGGACCTC GCCGCGACCC TCGGGGGCGC CGTGCTGATC CTCGCCGCCG CGGTCTCGCC CGCGATCGCG TCGATCGGGA CCGACGGGGT TCTCGACGCG GGAACCGGCG GTCTCGTCCG CGCGCTCGGC GGCGCGCTCG TCGGCGGCGG CGCGCTGCTG TTCGCCGGCA ACATGCTCGG GACCGTGATC CGGCACGGTG GGGTCGAGAT GGTCCGGCGA TCGGCGGTGG ACTCCGAGGC ATCGGACACG CCGGAGCGGT GA
|
Protein sequence | MRGVPGDLTT STRPPTTIPL RHFLVALAFL VAGGALALLR VAGLAGTGPG LDGIAVAHLL LVGWVCLTII GAMTQFVPVW SGVEIHSERL ATLQLVAVAV GVAGFATGLW LGRLADAALM AGVMVVGIAV FAYNLARTLW RARPFDTTET HFALAVGFLA LAAVFGGTLA ADYRWGVLVG TGLSRAAVVD AHVTLAVLGA VVTTVIGALY QLGPMFTQTD ALSVETRAAR IETAAYPVGV LALAAGRLVE QSVVATLGGL LVAGGVAVAG AVLLRRIRDA TGAATPMLSR YAVVGVATLA WSATALATWI RTPLGAGVRF GHPATGPVLL GALVGFVVVG SLYHVVPFIV WLDRYADRVG LERVPAIDDL YDARVATVDL AATLGGAVLI LAAAVSPAIA SIGTDGVLDA GTGGLVRALG GALVGGGALL FAGNMLGTVI RHGGVEMVRR SAVDSEASDT PER
|
| |