Gene Hlac_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1160 
Symbol 
ID7400969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1165611 
End bp1167002 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content74% 
IMG OID643708225 
Producthypothetical protein 
Protein accessionYP_002565824 
Protein GI222479587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.300381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGCG TTCCCGGTGA TCTCACGACC TCGACGCGCC CGCCGACCAC GATCCCGCTT 
CGCCACTTCC TCGTCGCGTT GGCGTTTCTC GTCGCTGGCG GAGCCCTCGC GCTCCTCCGC
GTTGCGGGGC TGGCGGGAAC GGGTCCCGGC CTCGACGGGA TCGCAGTCGC GCACCTGCTC
CTCGTGGGGT GGGTGTGTCT CACGATTATC GGCGCGATGA CGCAGTTCGT CCCCGTCTGG
TCGGGCGTCG AGATCCACTC CGAGCGGCTG GCGACGCTCC AGTTGGTCGC CGTCGCGGTC
GGCGTGGCCG GGTTCGCCAC GGGGCTCTGG CTCGGGCGGC TGGCCGACGC CGCCCTCATG
GCGGGCGTCA TGGTCGTCGG GATCGCCGTC TTCGCGTACA ACCTCGCCCG GACGCTGTGG
CGCGCGCGTC CCTTCGACAC CACCGAGACG CACTTCGCGC TGGCGGTCGG CTTCCTCGCG
CTCGCGGCCG TCTTCGGGGG GACCCTCGCC GCGGACTACC GATGGGGCGT GCTCGTCGGG
ACCGGGCTCT CGCGGGCCGC GGTCGTCGAC GCCCACGTCA CGCTGGCGGT CCTCGGCGCC
GTGGTGACGA CCGTGATCGG GGCGCTGTAC CAGCTCGGCC CCATGTTCAC GCAGACCGAC
GCGCTCTCGG TCGAAACGCG CGCGGCGCGG ATCGAAACCG CGGCGTACCC GGTCGGCGTC
CTCGCGCTCG CGGCCGGGCG GCTGGTCGAG CAGTCGGTCG TCGCTACCCT CGGCGGGCTG
CTCGTCGCCG GCGGCGTGGC GGTCGCCGGC GCGGTCCTCC TCCGTCGAAT TCGGGACGCG
ACCGGGGCGG CGACCCCGAT GCTCTCGCGG TACGCGGTCG TCGGCGTCGC GACCCTCGCG
TGGAGCGCGA CCGCGCTCGC GACGTGGATC CGGACTCCGC TCGGCGCGGG CGTCAGGTTC
GGTCACCCCG CGACCGGTCC CGTCCTGCTC GGCGCGCTCG TGGGGTTCGT CGTGGTCGGG
AGCCTCTACC ACGTCGTCCC CTTCATCGTC TGGCTCGACC GGTACGCCGA CCGGGTCGGA
CTGGAGCGCG TGCCCGCGAT CGACGACCTC TACGACGCCC GGGTCGCGAC GGTGGACCTC
GCCGCGACCC TCGGGGGCGC CGTGCTGATC CTCGCCGCCG CGGTCTCGCC CGCGATCGCG
TCGATCGGGA CCGACGGGGT TCTCGACGCG GGAACCGGCG GTCTCGTCCG CGCGCTCGGC
GGCGCGCTCG TCGGCGGCGG CGCGCTGCTG TTCGCCGGCA ACATGCTCGG GACCGTGATC
CGGCACGGTG GGGTCGAGAT GGTCCGGCGA TCGGCGGTGG ACTCCGAGGC ATCGGACACG
CCGGAGCGGT GA
 
Protein sequence
MRGVPGDLTT STRPPTTIPL RHFLVALAFL VAGGALALLR VAGLAGTGPG LDGIAVAHLL 
LVGWVCLTII GAMTQFVPVW SGVEIHSERL ATLQLVAVAV GVAGFATGLW LGRLADAALM
AGVMVVGIAV FAYNLARTLW RARPFDTTET HFALAVGFLA LAAVFGGTLA ADYRWGVLVG
TGLSRAAVVD AHVTLAVLGA VVTTVIGALY QLGPMFTQTD ALSVETRAAR IETAAYPVGV
LALAAGRLVE QSVVATLGGL LVAGGVAVAG AVLLRRIRDA TGAATPMLSR YAVVGVATLA
WSATALATWI RTPLGAGVRF GHPATGPVLL GALVGFVVVG SLYHVVPFIV WLDRYADRVG
LERVPAIDDL YDARVATVDL AATLGGAVLI LAAAVSPAIA SIGTDGVLDA GTGGLVRALG
GALVGGGALL FAGNMLGTVI RHGGVEMVRR SAVDSEASDT PER