| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1143 |
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| Symbol | |
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| ID | 7400952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1150690 |
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| End bp | 1151487 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643708208 |
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| Product | protein of unknown function RIO1 |
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| Protein accession | YP_002565807 |
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| Protein GI | 222479570 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.358332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCC GTCGGCTCGT GCGCGGCCGT GTGGACTGGC CCGACATCGA ACGGGTCGTC
CGCGAGCTGG CGGACCGGTA CGACCGCGAC GAGATGCGGG TGCGCTTCCT CGACGCCGAC
AACTGGCTGT CGACCCCGAT GGTGATCGAC GACGACCTGT TCGTGAAGGT GATCACCCGC
CAGAACACGA TCGTCCACGC GCTGTTCACC ACCGGACGGA ACCTCGGCGT CTTCTCCGCC
GGCACCGAAG GCTTCTTCGA GCGCTACGAG ACTCCCTACG AGATGGCGCT CCACGAGCTG
GAGGCGACCC AGAAGGTCCG CGAGATCGGC GTCAACGCCC CGGAGCCGAT TGAGGCCCTG
GAGGTCGGCG ACCTCGGCGT CGTCGTATTG GAGTACCTCC CCGAGTTTCG GACGCTCGAC
GAGCTCGACG CCGAAGACGT GGCGGCGCTC GCCCCGACGC TGTTCGAGAC CCTCCGGACG
ATCCACGACG CCGGGCTCGC GCACGGCGAT CTCCGCGCGG AGAACGTCCT GGTGCGCGAC
GGCGACCTCT ACGTCATCGA CGCGACGAGC GTGAGCGAGG CGGGTCGCGA GTCGGCGCGG
TCGTACGACC TCGCGAGCGC TCTCGCCGCG CTGGAACCCT TAATCGGCGC CGCCGCCGCC
ATCGACGCCG CGCTCGATAG CTACTCGACA GACGAAATTC TGGCTGCCCG GCAGTTCCTC
GACTTCGTCG CGATCCGACC CGACCACGAG TTCGACGCCG CCGCGCTCAC CGGCGAACTG
GAGAAGCGGG CGACGTAG
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| Protein sequence | MELRRLVRGR VDWPDIERVV RELADRYDRD EMRVRFLDAD NWLSTPMVID DDLFVKVITR
QNTIVHALFT TGRNLGVFSA GTEGFFERYE TPYEMALHEL EATQKVREIG VNAPEPIEAL
EVGDLGVVVL EYLPEFRTLD ELDAEDVAAL APTLFETLRT IHDAGLAHGD LRAENVLVRD
GDLYVIDATS VSEAGRESAR SYDLASALAA LEPLIGAAAA IDAALDSYST DEILAARQFL
DFVAIRPDHE FDAAALTGEL EKRAT
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