Gene Hlac_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1099 
Symbol 
ID7400171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1103565 
End bp1104956 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content65% 
IMG OID643708165 
Productamidohydrolase 
Protein accessionYP_002565764 
Protein GI222479527 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACG ATCTCGTCAT CGCGAACGGC ACCGTCGTCA CGCCCGAACT CGGCGCCTTC 
GAGGCCGATG TGGCCGCCGA CGGCGACGAG ATCGCCGCGA TCGCGAGTTC GGGGACTCTC
TCCGGCGACC GCGTGATCGA CGCCGAGGGG AAGTACGTCC TCCCGGGCGC GATCGACCCG
CACACTCACC ACGGGATCTA CCGCGGGCTC GAAGCCGACG CCGAGACGGA GTCGCGCTCC
GACCTCGTCG GCGGCGTCAC GACTATCGGG AACTACTTCC GGCGGGGCGG CTCCTACGAG
GAGATCATGG AGGGCTACTT CGCCGAGGCG GAGCCGAACT ACTACCACGA CTACTTCTTC
TCGTTGGGAC TGCTCTCGTT CGAGCACATC GAGGAGATTC CGTACATCGT CGAGGAGTTG
GGGATTACGT CGTTCAAGTG GTACAAGAAC TACAAAGACG TCGCGCCTGA GAAGTTCGGC
ACCGACTCCG AGATGCACGA CGACTGGGCG GACGCGTTCA TTCAGGCGCT CGCCGCGCAG
GACGTGCCCA CGACGCTCGG CCACCACTCC GAGAACATGG AGATCACGAG CGCGCTCGGC
GACAACCCGT ACCTCGACTC CGCGGTCGAC GAGGACCAGG AGTACCGCGA CTACGACGTG
TTGGTCGACC AGTTCCCGGA CTACGCGGAG ACGCAGAGCA TGACCGCGAG CGGCTCGTTA
GCCCGGCAAC ACGACTACGA CGACAGCTTC TACGCGGTCC ACATTTCGGC CGGACGGACC
GCGGACGAGC TGGCGATGCT CCACGACGCG GGGTGGGATA TCACCGGGGA GACGTGTACC
CACTACCTGA CGCTCACCGC CGAGGAGTGC GACGAGCGCC ACAACGTCAA TCCGCCGGTG
CGGTCGAAAG AAGACCAGGA GACGCTGTGG AAGCGCGTCG CCGACGGCAC GATCTCCTGT
ATCGGCACCG ACCACTGCGC GAACCTGCGC GACGACAAGG TCGGCGAGGA CGTGCCAGAC
AGCCTCCCCG GCTTCCCCTC GACGGCGACG ATGCTCCCGC TGATCCTCTC GGAGGGGGTC
AACGAGGGAC GCATCTCGCT CGAACGCGCG GTCGAGGTGA CTTCCACGAA CACCGCGAAA
GCGTTCGATA TATATCCGAA GAAAGGCTCC GTTCAGGTCG GAACCGATGC GGACCTGACG
GTCGTCGACC TCGACGAGAC GAAGACGGTG ACCCCGGAGC TGCTCCGCAG CGGTGCGGAC
TACTCCCCGT ACGAGGGGCG CGAGGTGACC GGGTGGCCGA CGCACACGGT CGTTCGCGGT
CAGGTCGCCT ACGAGGAGGG CGAGATCGTC GGCGAGTCGG GGTACGGAAC CCACATCGAT
CGCCCAATCT GA
 
Protein sequence
MTHDLVIANG TVVTPELGAF EADVAADGDE IAAIASSGTL SGDRVIDAEG KYVLPGAIDP 
HTHHGIYRGL EADAETESRS DLVGGVTTIG NYFRRGGSYE EIMEGYFAEA EPNYYHDYFF
SLGLLSFEHI EEIPYIVEEL GITSFKWYKN YKDVAPEKFG TDSEMHDDWA DAFIQALAAQ
DVPTTLGHHS ENMEITSALG DNPYLDSAVD EDQEYRDYDV LVDQFPDYAE TQSMTASGSL
ARQHDYDDSF YAVHISAGRT ADELAMLHDA GWDITGETCT HYLTLTAEEC DERHNVNPPV
RSKEDQETLW KRVADGTISC IGTDHCANLR DDKVGEDVPD SLPGFPSTAT MLPLILSEGV
NEGRISLERA VEVTSTNTAK AFDIYPKKGS VQVGTDADLT VVDLDETKTV TPELLRSGAD
YSPYEGREVT GWPTHTVVRG QVAYEEGEIV GESGYGTHID RPI