Gene Hlac_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1098 
Symbol 
ID7400170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1102871 
End bp1103536 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID643708164 
Productisochorismatase hydrolase 
Protein accessionYP_002565763 
Protein GI222479526 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1535] Isochorismate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGC GTATCTGGGA AGACCTGCTC ACCGAGCGCG ACAAACAGGT CATCTCGGCA 
GCCGGCTACG ACAAGGAGGG AGCGTCCTCG TGGGAGTCTC GCGGGATGGG GACGAACCCA
ATGGTCCTGG TCATCGACAT GCAGCGGCTC GTGGTCGGCG CGGACGAGCC CATCCTCAAC
GCAGTCGAGG AGTATCGCAC CGCCATGGGC GAGATCGCGT GGAACGCGAT CGACCACATC
GAGCCGTTCC TCGAGTTCTC CCGGAACCAC GAGATTCCGG TCACGTACAC CCGGGTCGTC
CCGTCGAGCT ACGACGACCC GAACCACGAG GACCTCGACA TCGTCGACGC CGTTGCCCCG
AAAGAGGGCG AGACGGTGAT CAACAAGTCG TACGCCTCCG CCTTCTACGG GACCGACCTG
CTCTCGCGGC TGGTCCGCGG CGGCCACGAC TCGGTGATCA TCGTCGGGAA CTCCACGAGC
GGGTGCGTCC GCGCGACCGC GATCGATGCC CAGCAGAACG GGTTCAACGT CGTGTTGCCA
CAGGAGTGCG TGTTCGACCG GATCGAGGCG AGCCACAAGA TCGCCTTGAT GGACCTGTGG
ATGAAGTACG CCGAGGTGCT CGAACGCGAC GAGGTGGAGT CGTGGGTGGA GGGGATCGAC
GAATGA
 
Protein sequence
MTKRIWEDLL TERDKQVISA AGYDKEGASS WESRGMGTNP MVLVIDMQRL VVGADEPILN 
AVEEYRTAMG EIAWNAIDHI EPFLEFSRNH EIPVTYTRVV PSSYDDPNHE DLDIVDAVAP
KEGETVINKS YASAFYGTDL LSRLVRGGHD SVIIVGNSTS GCVRATAIDA QQNGFNVVLP
QECVFDRIEA SHKIALMDLW MKYAEVLERD EVESWVEGID E