Gene Hlac_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0999 
Symbol 
ID7401894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp993369 
End bp993800 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content65% 
IMG OID643708065 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002565666 
Protein GI222479429 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTA CCTATCTCCC CTACGCGCTC CTCGCAATGG GCGCGTACGC GCTCGTCTCG 
CCGCTGATGC GGGTCGCGAC CACGGGACCG AATGCGGTCC CGAGCGACGT CGCCGTGGTG
ATCTCTAACT CGCTTCTCAT CTGCATGGCC GTGGGCGTGC TCGCGTACAC CGGACAGGGG
TTCGTCGGCC ATCTCACTTC GCCGAAAATC GTCCACGTGC TCGCGGCCGG CGTCTTCCTC
GGGATCGGAA TCTTAGCGCT GTACCGCTCG CTCGCGCTCG GTCCGGTGAG CGTCGTGACG
CCCATCTTCG CGATGTTCCT CGTGTTCTCC TCGGTGATCG GCTTCGTCTT TCTGGGCGAG
TCGTTCACCG CTCGGAAGGC GGTGGGGATC GCTTTCGCCG TGGCGTCGGT GTACCTCGTC
TCGGGCGCCT GA
 
Protein sequence
MDATYLPYAL LAMGAYALVS PLMRVATTGP NAVPSDVAVV ISNSLLICMA VGVLAYTGQG 
FVGHLTSPKI VHVLAAGVFL GIGILALYRS LALGPVSVVT PIFAMFLVFS SVIGFVFLGE
SFTARKAVGI AFAVASVYLV SGA