Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0998 |
Symbol | |
ID | 7401893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 991735 |
End bp | 993237 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708064 |
Product | MATE efflux family protein |
Protein accession | YP_002565665 |
Protein GI | 222479428 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.280475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCGCC TCCCGAACCC GTTCCGTGCG CTAATCTTAT ACATCGGCTT CGCCCTCGCG AGGGCGGGGC TGATCGACCG TCACCGCGTG GTCCGGACGA CGGACCTCGC GTGGCCGCGG ATCGTCACGG GGATCGCCCG GATGTCGAAG AACGCGGTCG ACGTGGCGAT GGTCGGCGTC GCCGTCGGCA CCAGCGCGGT CGCCGGCGTC GGCTTCGCCG GCCCCTACTG GGGGCTCGCG TTCGCGCTCG GCGGCGGCGT CGCCGGCGGC ACCATCGCCT TAGTCTCCCA GCGGTTCGGC GCGGAGGCGT ACGCGGAACT GGGCGACGCC GTCCGGGCGA GCGTCCTCCT CGCTATCGTG ATCACGATCC CCGTCTCGGT CACCTTCTGG ACGTTCCCGA CGCGTTTCAT CGACGTGTTG AGCAGCAACG AGGCCGCGAT CGCGTTCGGC GCCGACTACC TCCGGATCGT CGGGCTCGGC GTTCCATTCG CCGCGCTCAA CCTCGTCGGC AGCCGGGTGC TGGTCGGCTG CGACGACGCC TACACCGCGA TGCAGGTTCG AGCCGGCGGC GCGATCGCGA ACATCGTGCT CAGCGCCGCG TTCATCTTCG GGCTGGGGTG GGGCGTCGAG GGCGCCGCGC TCGGTACCGT CCTCTCGAAC GTGCTCGCCG TCGCCGCGTT CGCGGTCGGG CTCCTGCGGG GGCGACTCCC CGGAATGGGC GAGTTCCCGA TCGCGATCGA CCCGTTCGGC TCGTACGTGA ACCCGGACAT GCTCCACGAC CTCGTCGAGA TCGGGGTTCC GGTCGGCGCG CGCAACCTCG TGTGGACGGC CGCGGAGTTC CCAATGCTCG CCATCCTCGA CGTGTTCGGC GAGAACACCG TCGCCGCGTT CGTCATCGCC CGGCGTATCT GGGGGATCAT GAACGCCCCC GGCTGGGGCT TCGGGCTCGC CTCCTCCAGT CTGGTCGGGC AGGAGCTCGG CGGCGAGGAC CCCGCAGAGG CGGAGGCGTA CGCCCGCGAC ATCATCCGCT TTTCCGTGGC GACGTACGTG GTCTTCGCGG CGCTGACGGC CGTCTTCGCA GGCGACATCG TGGCGCTGTT CGCGGAGAGC CCGGAGAGCC CCGAGGTGCC GATCGCGATC ACGTTCGTGT ACGCGGCCTG CGTCGCCGTC GTCTTCCAGG GGATCTCGGG TGGAGCGGCG GGGCCGCTCG ACGCGGCCGG CGACACGAAG ATCCCCTTCG CGAGCCAGTT CCTCGGCATG TTCTGCGTGT CGATTCCGCT GGCGTACGTC GGGGCGTACG AGGCGACGCC CGCCATCGAC GTGCCGGGGC TCGGCGTGAC GATCCCGGAG ATCGCGCTCC CCGCGATCGG GCTGTGGGGC GTGTACTTGG CGTTCGTCGC CGAGACGACG ATCCCCGCCG CGATCAACTA CTGGCGGTTC CGGTCCGGGA AGTGGAAGGC GATCAGCGAG GCGTACCGGC CGGACGCTCC CGTGGACGAC TAA
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Protein sequence | MARLPNPFRA LILYIGFALA RAGLIDRHRV VRTTDLAWPR IVTGIARMSK NAVDVAMVGV AVGTSAVAGV GFAGPYWGLA FALGGGVAGG TIALVSQRFG AEAYAELGDA VRASVLLAIV ITIPVSVTFW TFPTRFIDVL SSNEAAIAFG ADYLRIVGLG VPFAALNLVG SRVLVGCDDA YTAMQVRAGG AIANIVLSAA FIFGLGWGVE GAALGTVLSN VLAVAAFAVG LLRGRLPGMG EFPIAIDPFG SYVNPDMLHD LVEIGVPVGA RNLVWTAAEF PMLAILDVFG ENTVAAFVIA RRIWGIMNAP GWGFGLASSS LVGQELGGED PAEAEAYARD IIRFSVATYV VFAALTAVFA GDIVALFAES PESPEVPIAI TFVYAACVAV VFQGISGGAA GPLDAAGDTK IPFASQFLGM FCVSIPLAYV GAYEATPAID VPGLGVTIPE IALPAIGLWG VYLAFVAETT IPAAINYWRF RSGKWKAISE AYRPDAPVDD
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