Gene Hlac_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0952 
Symbol 
ID7401846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp947327 
End bp948406 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content69% 
IMG OID643708018 
Productcarboxylate-amine ligase 
Protein accessionYP_002565620 
Protein GI222479383 
COG category[S] Function unknown 
COG ID[COG2170] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02050] uncharacterized enzyme 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCG GTTCGCGGGA CGCGTTCGCC CGGATGGAGA CCCTCGGCAT CGAAGAGGAG 
TTCTACATCG TCGATGCCGA CGGCCGCCCG ACCTCGGGGA TTGACGATCT CGTCTACGGC
CGCGATCCGC CGGCGGAAGT CCCGGAGGGG TTCGACCACG AGCTGTTCAA GTGCACCATC
GAGGCCCAGA CGGAACTGAT CGAAGATCCG TCGAACGCGG TCGACGCCCT CTCGACGGTG
CGGGCGGCGC TCGTCGATCA CGCCGCCGCC GACGGCTACC GGATCGCGGC CGCGGGCCTC
CACCCGGCCG CGAAGTGGCG GGAGCTCGAA CACGCGGAGA AGCCGCGGTA TCAGGCGCAA
CTCGACCGGA TCCAGTACCC GCAACACCGA AACACGACGG CGGGGCTCCA CGTCCACGTC
GGCGTCGACG ACGCGGACAA GGCCGTCTGG ATCGCCAACC GACTCCGGTG GCACTGCCCC
GTGCTGCTCG CCCTCTCGGC GAACTCCCCG TTCTGGAACG GCTTCGACAC CGGGCTCGCG
TCGGCCCGTG CGAAGATCTT CGAGAATCTC CCGAACACGG GGATCCCCTC CGCGTTCGAC
GACTTCGACG CCTTCCAGCG CTACGAGCGC CGGATGGTCG AGCGGGGCTC TATCGCCGAC
CGCGGCGAAC TCTGGTTCGA CGTGCGCCCC CACACTGGCC ACGGCACGGT CGAGGTGCGC
GCCCCGGACG CCCAGCGCGA CCCCGGGGTC ACTCTCGCGT TCGTCGAGTA CGTCCACGCC
CTCGTCGTCG ATTACGCCGA GCGCTACGCG GACGGCGAGT CCCCGCCGAC CCTCCGCCGG
GAGCTGTTAG ACGAGAACAA GTGGCGGGCG ATCCGCCACG GTCACGACGC CTCCTTCATC
ACTCGCGACG GCGAGGACAC GGTCTCGCTC GGCGAGGCCG TCGCCGACGA GTGCGACCGC
CTCGGAATCG ACGGGATCCG AGACGTGTAC GACGCCGAGA GCGGGAGCCA GCGCCAGCGC
CGACTCCGCG AGGAGGGCGG TCTCGACGCG CTCTGTGACG ACCTCATGCT GTCGCCGTAG
 
Protein sequence
MELGSRDAFA RMETLGIEEE FYIVDADGRP TSGIDDLVYG RDPPAEVPEG FDHELFKCTI 
EAQTELIEDP SNAVDALSTV RAALVDHAAA DGYRIAAAGL HPAAKWRELE HAEKPRYQAQ
LDRIQYPQHR NTTAGLHVHV GVDDADKAVW IANRLRWHCP VLLALSANSP FWNGFDTGLA
SARAKIFENL PNTGIPSAFD DFDAFQRYER RMVERGSIAD RGELWFDVRP HTGHGTVEVR
APDAQRDPGV TLAFVEYVHA LVVDYAERYA DGESPPTLRR ELLDENKWRA IRHGHDASFI
TRDGEDTVSL GEAVADECDR LGIDGIRDVY DAESGSQRQR RLREEGGLDA LCDDLMLSP