Gene Hlac_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0896 
Symbol 
ID7401267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp887920 
End bp888294 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content63% 
IMG OID643707961 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_002565564 
Protein GI222479327 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.711423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGA ACGACCGGAC CCGCGTCAGC GAGGTCATGT CGACACCCCT CGAAACGATC 
GGGGCGAACG AGCCGCTCCG GGAAGCGGCG CGTCGGATGA GCGATAGCGA CATCAGCGCA
CTCGTCGTGA CGACCGGCGG CGGCTGTATC GTCACACAAA GCGATATCGT CGGCGCCGTC
GCCGAGGGGG AAGATACCAC GGAGACGACG GTTCGGGACG TGATGACCCG GAACGTCGAG
ACCGTGACGC CGGACCTCAT GATGGAGGAG GTGGCCGCGA TGATGACGAT GTACGGCGTG
AAACACCTCC CGGTCGTCGA CGACGACTAC GTCGGGATGG TTTCTTCGAC CGATATCGCC
GAACACCTTT CGTGA
 
Protein sequence
MDLNDRTRVS EVMSTPLETI GANEPLREAA RRMSDSDISA LVVTTGGGCI VTQSDIVGAV 
AEGEDTTETT VRDVMTRNVE TVTPDLMMEE VAAMMTMYGV KHLPVVDDDY VGMVSSTDIA
EHLS