Gene Hlac_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0876 
Symbol 
ID7401246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp865957 
End bp867120 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content67% 
IMG OID643707941 
Productpyruvate carboxyltransferase 
Protein accessionYP_002565544 
Protein GI222479307 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATAGCTTCTA ACATCGATAT CGGTCCTGTA CGGATCTTCG ACACGACGTT ACGAGACGGT 
GAACAGTCAC CGCGCACGTC GTTCAGCTAC GACGAGAAAC GCCGCATAGC GGCGACGCTG
GACGACATGA ACACCCACGT CATCGAGGCG GGGTTCCCGG TGAACTCGGA CGCGGAGTTC
GAGGCCGTGA GCGACATCGC CGCCGCGACG AACACTACCG TCTGCGGGCT GGCGCGGGTC
GTCGAGGGCG ACATCGACGC CGCCATCGAC TCCGGCGTCG AGATGGTCCA CGTGTTCGTC
TCCACCAGCG ACGTACAGCT GGAGGATTCG ATGCACGCGA CCCGGCAAGA GGCGAAACAG
CGCGCCGTCG CCGCCGTCGA GCAGGTGAAA GATGCCGGCG TCGAGTGCAT GTTCTCGCCG
ATGGACGCGA CGCGGACCGA CCCCGACTAC CTGCGAGAGA TCGTCGAGGC GGTCAGTGAC
GCGGGCACGG ACTGGATCAA CATCCCGGAC ACGTGCGGCG TCGCGATGCC GACCAGCTTC
GGGAAGACGG TGAAGGCGGT CGTCAATGCG ACCGACGCCC GCGTCGACGT GCACACCCAC
GACGACTTCG GGATGGCCGC GGCGAACGCG GTCATGGGCT TCGAGAACGG CGCGGAGCAG
GCGCAGGTGT CGGTCAACGG GATCGGCGAG CGCGCCGGCA ACGCCGCCTA CGAGGAGGTC
GTGATGGCGG TCGAATCGGT GTACGGCGTC GACACCGGCA TCGACACGAC TCAGATCACC
AAGCTGGCCC GGATCGTCGA GGAGGCCTCG GACATCCCGG TGCCGGCGAA CAAGCCCGTC
ACCGGGCGAA ACGCGTTCGC CCACGAGTCG GGCATCCACG CCGCCGGCGT CATCGAGAAC
GCCGACACGT TCGAGACCGG CGTGATGACT CCCGAGATGG TCGGGGCCGA ACGCGAGTTC
GTCCTCGGGA AACACACCGG CACCCACAGC GTGCGCAAGC ACCTGGTGGA GGCCGGCTTC
GACCCGACGG ACAGCGAGGT CCGGCGGATC ACCAAGCGCG TCAAGGAGTA CGGCTCCGGC
AAGCGTCAGG TGACTGCCGG CGATGTCGAG CGGTTCGCCG AGGAGGCAGA CATCGACCGC
GAGGAGGAGG AGGTCCGGAT CTGA
 
Protein sequence
MASNIDIGPV RIFDTTLRDG EQSPRTSFSY DEKRRIAATL DDMNTHVIEA GFPVNSDAEF 
EAVSDIAAAT NTTVCGLARV VEGDIDAAID SGVEMVHVFV STSDVQLEDS MHATRQEAKQ
RAVAAVEQVK DAGVECMFSP MDATRTDPDY LREIVEAVSD AGTDWINIPD TCGVAMPTSF
GKTVKAVVNA TDARVDVHTH DDFGMAAANA VMGFENGAEQ AQVSVNGIGE RAGNAAYEEV
VMAVESVYGV DTGIDTTQIT KLARIVEEAS DIPVPANKPV TGRNAFAHES GIHAAGVIEN
ADTFETGVMT PEMVGAEREF VLGKHTGTHS VRKHLVEAGF DPTDSEVRRI TKRVKEYGSG
KRQVTAGDVE RFAEEADIDR EEEEVRI