| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0849 |
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| Symbol | |
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| ID | 7400815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 842727 |
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| End bp | 843452 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643707915 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_002565518 |
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| Protein GI | 222479281 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTCGC TCGACGAGGC CGTGACGGCC CGATTGGAGT CACACGGCGA ACGGTTCGAG
GTGCTGATCG ACCCCGACGC CGCGCTCGCG ATGAAACGGG GCGAGTTCGA GGGCAACCTG
GAAGACGTGA TCGCCGCCGA GGACGTGTTC GAGAACGCCT CGCGGGGCGA TCGCCCGGCC
GAAGAAGACC TAGAGACCGT GTTCGGCACG ACCGACCCGC TGGAGATCAT TCCCGAGGTC
GTCGAGCGCG GGGAGATCCA GATCACCGCC GAGCAGCGCG AGGAAATGAT GGAACGCAAG
CACAATCAGC TTGTCACCAC CATCACGCGC AACGCGGTGA ACCCGCAGAT GGATGACTCG
CCGCACCCGC CCGAACGCAT CGAGCGCGCC TTAGAGGAGG CGGGTTTCCA GATCGATCCG
ATGGAGCCGG TCGAGAATCA GGTCGACGAC GCGCTCGAGG CGCTCCGCCC GGTGATACCG
ATCCGTTTCG AGGAAGTGAC GATGGCGGTC CAGCTCCCCG CCGACTACGC GGGATCCGGG
CAGGCCCAGA TCCGAGAATT CGGCGATCTG GAACGCGAGG AGTGGCAGAA CGACGGATCG
TGGGTGGGCG TCCTCACCTT CCCCGCCGGA CTTCAAAACG ACCTGTACGA TCTCGTCAAC
GAGGTCACGT CCGGCGAGGG CGACGCTCGC GTGATCAAGG ACAAAGACGA GCTACGGACG
CGGTAG
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| Protein sequence | MISLDEAVTA RLESHGERFE VLIDPDAALA MKRGEFEGNL EDVIAAEDVF ENASRGDRPA
EEDLETVFGT TDPLEIIPEV VERGEIQITA EQREEMMERK HNQLVTTITR NAVNPQMDDS
PHPPERIERA LEEAGFQIDP MEPVENQVDD ALEALRPVIP IRFEEVTMAV QLPADYAGSG
QAQIREFGDL EREEWQNDGS WVGVLTFPAG LQNDLYDLVN EVTSGEGDAR VIKDKDELRT
R
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