| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0828 |
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| Symbol | rpl39e |
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| ID | 7400794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 823011 |
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| End bp | 823163 |
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| Gene Length | 153 bp |
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| Protein Length | 50 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643707894 |
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| Product | 50S ribosomal protein L39e |
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| Protein accession | YP_002565497 |
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| Protein GI | 222479260 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2167] Ribosomal protein L39E |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00308743 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAGACA AGTCGAAGGC TCAAAAAAAG CGTCTGGCGA AGGCGGAACG CCAGAACACC
CGCGTCCCCG CGTGGGTCAT GATGAAGACG GACATGAACG TGACGCGAAA CCCCAAGCGG
CGCAACTGGC GCCGGAACGA CCTGGACGAG TAA
|
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| Protein sequence | MGDKSKAQKK RLAKAERQNT RVPAWVMMKT DMNVTRNPKR RNWRRNDLDE
|
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