| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0816 |
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| Symbol | |
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| ID | 7400781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 813869 |
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| End bp | 816232 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643707881 |
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| Product | helicase c2 |
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| Protein accession | YP_002565485 |
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| Protein GI | 222479248 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.524115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGACG CCCCCCCGTG GACCGACCTC TTCGGCCACG CAGAGCCGTA CCCCGAGCAG
GCTGACGGGA TCGACGCCGC GATCGACGCC GCCGAGGACG GCGGCTTCCT CGCGCTGGAG
GGCGCGTGCG GGACGGGCAA GACGATGCTC GCGCTCACCG CCGGACTCGA CCGCGTTCGC
GACCCCGACT CCGACTTCGA GCGTGTGTTC GTCCTCACGA GCGTCAAACA GCAGCTCCGC
CAGTTCGAGA CAGACCTGGA AACGATCAAC GGGGACCTCC CAGATGGGTA CGACCCGGTC
TCTGGGCTCA CGCTCGTCGG GAAGGCGGAC GTGTGCCCGT ACGCTCGCGA GAACCGCGGC
GGGATCGACC GCGAGAACGT GTACGAGCGC TGTGAAGGGC TCCGCGAGCG CACCCGAAAC
CTCGTCGGCG ACGGTGGCGC GACCACGACA TCGAACCTCG TGAGCGAGGC ACAGAGCCAA
CAGGTCGGCC TGTTGGACTC GGGGAACAGG GGCGGCTCGG CCACCGGTGA TTCGAGCGCC
GCCGACTACC TCAGCGTTGA CGGCGATCCT ACCCCGTACC GACCGGACAC AGAGGAGTTC
GAGGGCACCG AGTTCTGCCC GTTCTACGCC GGCTTCCTCG ACGACCTTCC GGAGGACGGC
GATCCCGCGG AGGCGGTCCC GTTCGACGTA ACGGAACTCG GCCACGTCGG ACCGACAGAG
CTGGTCCGGC TCGCCGCCGG CCACGGCACC TGTCCGCACT CGATCATGGG TGCGCTCGTC
CCCGAGGTCG AGGTCGTGAT CGGCAACTAC TACCACGCAT TCGACCCCGT CACGACCGGG
ACGTTCACGG GCGCGCTGCT GGACAACTCG ACGTTCGTCG TCTGCGACGA GGCCCACATG
CTCGAACCCC GCGTGCGCGA CCTCGTGAGC GACGCTGTCG CCGACGCCAG CCTCCGTGAC
GCGGAGAACG AACTCACGCG CGTCGTCCAG CCGCTCTCGT TCGAGACGGC CGGCGCAGAG
TCGGACGACG CCGAACTCGT CCGTGGCGAG CTGGAGGACG CCGACGTGAG CGTCGACGAG
ATCGAGTCCG TCCGAGAATT TTACGCGGAT CTCCGCGGAG AGCTCGACCG CCGCGTGACC
GAGCGGCTGG ACCGAGAGCG CCCAGACTGG CGGGCATCGA TGCGCGAACT CGATGACGAC
GAGGTCCCCC TCCGTGACCC GGAAGAGCCG GGTGAAGACG AGATCACGGC GTGGGCGAAA
CGGGAGGGGT ACGGTGACCG CGTCTGGGCC CGCGCGGAGC AGGTCGGCGC GGTCGTCAAA
CGCGTGCTCG ATTCGCTGGA GGAGGAGGAC AAACAGCGCG CTGCGCCGGG CGTCGGCCGC
ACCCTCAACG CGTGGTACCG CGAGGGCCAC GATGACTTCT TCCGGGCGAT CGATCTGGAG
CGGACGTGGG ACGAGACGGC GCCGCCCGAC TCGTGGCGGC GCGCGTACAA CGCGAGCCTC
GCGCTGTACA ACTGCCTGCC GAGCGAACCG ATCGGCGACC GGCTCGCGGA GTTCGGCGGC
GGCGTGCTAA TGAGCGCGAC ACTGGAGCCG ATGGACGTGT TCCGCGAGGT GACTGGGCTC
GATCACCTCG AACAGCGCGG ACGGCCAGTC GTCGAGCGGA CATACGGCCT GTCGTTCCCG
CCCGAAAACC GTGCGAGTTT CGCTGTCGAC GCGCCGAAGT TCACTCACCA GAACCGCGGG
GCACCCGGCG AGGAGAACGA CACGCGACTC GCGCACCTCG ACGCGACCGT GGCGGTAGCG
AGCCGTGAGG GGAACGTGCT CGTCGGAACG CCGAGCTACG CGGAGGCGAC GTGGATGGCC
GAGTCGCTCT CGAAACGACT GGACAAGCCC GTGCTGCTCG ACGAGTCGTC GGGCGACCGC
GCCACGGAGT CGCTGAAAGA CGACTTCTTC GCGGGCGACG GGAAGGTCCT CGTGACGAGC
CTCCGCGGCA CGCTCACGGA AGGCGTCGAC TACCGCGGCG ACCGTCTGTC GGCCGCCGTG
GTCTGTGGCG TCCCGATCAT CAACACGGCG CGGCCGCGGA CGCGGGCGGT GATCACCGCT
TACGACAGGC GGTTCGAGTC GGGATTCGAA ACCGCCCTCA CTGTTCCGGC GGTCCGGAAG
GCCCGGCAGG CCGTCGGCCG GGTCATTCGT GGGACGGACG AACACGGAGT TCGCGTCCTG
CTCGACGCCC GGTACGCGCG TGAGTCGTGG AACAGCGTCC GGGAGTACCT CCCGGACCAC
GAGCGCGAGG AGTACCAGCC GGTAAGCCCG GACATGCTCG GACTCGCGCT TGACCGGTTT
GAGCGGCAGG TCGGCAACGA GTGA
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| Protein sequence | MTDAPPWTDL FGHAEPYPEQ ADGIDAAIDA AEDGGFLALE GACGTGKTML ALTAGLDRVR
DPDSDFERVF VLTSVKQQLR QFETDLETIN GDLPDGYDPV SGLTLVGKAD VCPYARENRG
GIDRENVYER CEGLRERTRN LVGDGGATTT SNLVSEAQSQ QVGLLDSGNR GGSATGDSSA
ADYLSVDGDP TPYRPDTEEF EGTEFCPFYA GFLDDLPEDG DPAEAVPFDV TELGHVGPTE
LVRLAAGHGT CPHSIMGALV PEVEVVIGNY YHAFDPVTTG TFTGALLDNS TFVVCDEAHM
LEPRVRDLVS DAVADASLRD AENELTRVVQ PLSFETAGAE SDDAELVRGE LEDADVSVDE
IESVREFYAD LRGELDRRVT ERLDRERPDW RASMRELDDD EVPLRDPEEP GEDEITAWAK
REGYGDRVWA RAEQVGAVVK RVLDSLEEED KQRAAPGVGR TLNAWYREGH DDFFRAIDLE
RTWDETAPPD SWRRAYNASL ALYNCLPSEP IGDRLAEFGG GVLMSATLEP MDVFREVTGL
DHLEQRGRPV VERTYGLSFP PENRASFAVD APKFTHQNRG APGEENDTRL AHLDATVAVA
SREGNVLVGT PSYAEATWMA ESLSKRLDKP VLLDESSGDR ATESLKDDFF AGDGKVLVTS
LRGTLTEGVD YRGDRLSAAV VCGVPIINTA RPRTRAVITA YDRRFESGFE TALTVPAVRK
ARQAVGRVIR GTDEHGVRVL LDARYARESW NSVREYLPDH EREEYQPVSP DMLGLALDRF
ERQVGNE
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