| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0718 |
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| Symbol | |
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| ID | 7400191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 730092 |
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| End bp | 732041 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643707784 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002565390 |
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| Protein GI | 222479153 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.746522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAG GAAAATTTAT CCGCGCTCCA GTCTTGCTCA TCTGTATAGT GAACACCGAG
CCCAGCGGGC GGTCGTCCGT CCTCGTTCTC GCTGGCGACG CGGACGAGGC GGCCGACGTG
GCCGACGCGT TGGAAAGCGC CGACGCCGCT CCCGCACCCG TCGACGGCTC CCCCCGACCT
TCCGTCGACG ACGCCGTCTC CCCCACCTCC GTCGACGACC TCGCGACCAC GGACGTGGCT
ATCGTCCTTG ACGCCGAGGG ACTCGACGCG ATCCGTGGTC AGAACCGGTC GTGCCGTGTG
GTCGCGTTCG TTGACGACCC CGCCACAGAG CCAGCAACCG ATCCCCTCGT CGACGTGATT
GCGACCACGC CGGCGGATCT CGATGCGACG CTCCGCTGGT TCGCGGCCAG AGGCGAGTCC
GGCATCGACC GCGACGACCC GACGCGAACG CCTTCGCGGA TCGAGCAGCT CAACGCAGAG
GTGACCCGCC TCGCGTCGGT CAGGTCGATA GAGGGGGCTC ACCGAACCGC GATCGCCGTC
GCCGCCGAAG TGTTCCCGCG GTACCACTGC GTCGTCGGCG TCCGCGACGG GGAGTGGGTC
GAACCGATCG CGACCTCGTC CGGGGTCTCG ATCGACGACT GTAACCGCGT TCGAGTCGGG
CGCGGCTCGG CCGGAACTGC GATCGATACC GGCGATCCGG TGATCGAGTC CCGAACGATA
GGCGAGGCCC CCTACGACGC GCTTCTCTCG CTTCCGGTCG GCGACGAGAC GGTACTCCAG
CTCGCGGCCG ACGAAGACGA TGGGTTCGAC GCAGGTGACC GCCGCCTCGC GGAGCTGCTC
GCGTCCCACG TCGAGGAGAC GCTCGACAGG ATCCGCGCCG ACGAAGCGCT TCGGACCGAG
CGGGACCACC TGCTCGCGCT GTTCTCGAAC GTCCCCGACC CGGCGATCGC CTACGACTAC
GTCGACGGCG AGCCGATCGT TCACCGAGTC AACGACGCGT TCGAAGAGAC GTTCGCCTAC
GACGCCGATC GCGTGGTCGG CGAGTCCGTC GACGACTATA TCGTTCCCCC CAGCGACGAG
GCCGAAGCCG AGGCCGTGGA ACTCAACGAG CGGCTTCAGT GCGGCGAAAA CGTCAGACGC
GAGGTGACCC GCGAGACCGC TGACGGCCTT CGACACTTCA TCCTCCACGT CGTGCCGATC
CGGCTCGACG CCGAGAACGT CTCCGGATAC GCTATCTACA CCGATGTGAC GGAGCGACGT
GAGCGCGAGG CGGCGCTCCG CAGACAGAAC GAACGGCTCG ACGAGTTCGC AAGTATCGTC
TCCCACGACC TCCGAAACCC GCTTTCCGTC GCAGAGGGAT ACGTCACCCT CGCGAACGAG
ACCGGCGAGA TCGCCCATCT CGAGAAAACC CTGGAGGCGC TGGACCGCAT GGACGAGCTC
GTCGGCGACC TGCTCTCGCT GGCCCGACAG GGAGAGGCGG TCGGCGAGAC CGAACCCGTC
TCGATCGAGG CGATCGCGAG GGACGCGTGG GAGAGTGTCG ACACCGACGG CATCGAGCTC
GTCGTCGACG GCGACGTGAC GATCGATGCA AGTCCGACCC GGACGCGAGA GCTGCTGGAG
AACGTGTTTC GAAACAGCGT GGAGCACGGC CGGCGCTCCT CAGGTGGGAA CGACGGCGGC
GACGGCAAGC CGCTTACGGT GCGCGTCGGC GACACTGCGT TCCGCGGCGA CGACGGGACA
ACGGGGAGCG GCTTCTTCGT CGAAGACAAC GGTTGTGGGA TCCCCGAGGG CGAGCGCGAC
CGCGTGTTCG AGAGCGGATT CACGACCGAG GAGGGCGGGA CCGGCCTCGG GCTCGCGATC
ACGAAGCGGA TCGCCGACGC GCACGACTGG CAGGTGCGCG CGCTCACCGG CGAGTCCGGC
GGGGCGCGGT TCGAGTTCAA AACGTCGTGA
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| Protein sequence | MTEGKFIRAP VLLICIVNTE PSGRSSVLVL AGDADEAADV ADALESADAA PAPVDGSPRP
SVDDAVSPTS VDDLATTDVA IVLDAEGLDA IRGQNRSCRV VAFVDDPATE PATDPLVDVI
ATTPADLDAT LRWFAARGES GIDRDDPTRT PSRIEQLNAE VTRLASVRSI EGAHRTAIAV
AAEVFPRYHC VVGVRDGEWV EPIATSSGVS IDDCNRVRVG RGSAGTAIDT GDPVIESRTI
GEAPYDALLS LPVGDETVLQ LAADEDDGFD AGDRRLAELL ASHVEETLDR IRADEALRTE
RDHLLALFSN VPDPAIAYDY VDGEPIVHRV NDAFEETFAY DADRVVGESV DDYIVPPSDE
AEAEAVELNE RLQCGENVRR EVTRETADGL RHFILHVVPI RLDAENVSGY AIYTDVTERR
EREAALRRQN ERLDEFASIV SHDLRNPLSV AEGYVTLANE TGEIAHLEKT LEALDRMDEL
VGDLLSLARQ GEAVGETEPV SIEAIARDAW ESVDTDGIEL VVDGDVTIDA SPTRTRELLE
NVFRNSVEHG RRSSGGNDGG DGKPLTVRVG DTAFRGDDGT TGSGFFVEDN GCGIPEGERD
RVFESGFTTE EGGTGLGLAI TKRIADAHDW QVRALTGESG GARFEFKTS
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