Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0707 |
Symbol | |
ID | 7400180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 721460 |
End bp | 722533 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643707773 |
Product | respiratory-chain NADH dehydrogenase subunit 1 |
Protein accession | YP_002565379 |
Protein GI | 222479142 |
COG category | [C] Energy production and conversion |
COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000356542 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGACGG CACCCGCACA GCTGTTTCCC GAGTTCCTCG TCGACACGTT CGGACTTCCG GGCGTGCTCG GTGAGGTCGT CGCCTCGCTG ATCGGGGCGG CGCTCGTCGC CAACATCATC CTCGCGTTCT CCGGCATCGC CGGACCGTGG GCGAAACGGA AGATCACGGC CGCGTTCACC GACCGGATCG CGGTCAACCG GATCGGGCCC TTCGGGCTAC TCATTATCCC GGCGGCGGCC GTCCAGCTGC TCGCGAAGGA GCTTATCATC CCCGAGGGGG TCGACCGCCC GACGTGGGAT ATCGCTCCGA TCCTCCTGCC GGCGTCGGCG ATGCTCGGGT TCTCCGTGAT CCCGATGGGC CAGATCGGCC CGCTGAACAT TCACCTCGCC GACCCCGAAG TCGGGCTGGC GCTGGTGTTC GCGTTCGCCT CCATCGCTTC AGTCTCGCTG GTGATGGCCG GCTACGCGTC GAACAACAAG TACTCGCTTC TCGGCGGGCT CCGCGCCGTC GCGCAGAACC TCGCGTACGA GATCCCGCTC ATCGTCACCG CGATGTCGGT CGTGGTCTTC GCAGGGACGC TCCAGATAAG CGGTGTCGTC GGGGCGCAGA CGGAGACGCT CGTGACGATC GCCGGCTTCG ACATCCCGGC GTGGTTCGCG TTCGTGAACC CGTTCGCGTT CGTGCTGTTC CTCACGGCGA ACATGGCGGA GATCGGGCGG AATCCGTTCG ACATCCCCGA GGCACCGACG GAGATTGTCG GGGGGTACCA GACGGAGTAC TCATCGGCGT ACTTCGTCCT GTTTTACCTC GGCGAGTTCG TCCACATCTT CCTCGGCGGT GCGATCCTCT CCGTGGTGTT CCTCGGCGGC GCGTCCGGTC CGGGCCCGGA GAGCATCAGC TTCATCTGGT TCGTGGTGAA GGTCTGGGGC TTCTTCCTGT TCACGCAGTG GGCCCGCGCG GCAATCCCTC GCGTCCGGAT CGATCAGCTG ATCGAGATCG GCTGGAAAGG GATGTTAGTG CTGTCGTTCG CGAACCTGGT GCTCACGGCC GTAATCGTGG GGGTGATCGC CTGA
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Protein sequence | MGTAPAQLFP EFLVDTFGLP GVLGEVVASL IGAALVANII LAFSGIAGPW AKRKITAAFT DRIAVNRIGP FGLLIIPAAA VQLLAKELII PEGVDRPTWD IAPILLPASA MLGFSVIPMG QIGPLNIHLA DPEVGLALVF AFASIASVSL VMAGYASNNK YSLLGGLRAV AQNLAYEIPL IVTAMSVVVF AGTLQISGVV GAQTETLVTI AGFDIPAWFA FVNPFAFVLF LTANMAEIGR NPFDIPEAPT EIVGGYQTEY SSAYFVLFYL GEFVHIFLGG AILSVVFLGG ASGPGPESIS FIWFVVKVWG FFLFTQWARA AIPRVRIDQL IEIGWKGMLV LSFANLVLTA VIVGVIA
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