| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0672 |
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| Symbol | |
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| ID | 7401807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 688638 |
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| End bp | 689861 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643707738 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002565344 |
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| Protein GI | 222479107 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.573003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0211089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGG CGGCGTTCGA CTCGGTCTCG TTCTTGGAGC AGGCGGTTCA GACCCCCTCT
CACGAGTCAG TCGACGAGAT GCGCGAGTTC GTCGTCGAAA CGCTCGACCA GTTCGGGGCC
GAAAGTGAGG TCGTCGCGGG CGGGTGCGTG CTCGCGAAGA AGTACTCGGA CGCGCCCGGC
GAGGGGCCGC ATCTCGTGTT GAACACCCAT CTCGACACGG TGACGCCGCA CGTCCCGTTC
GAGCGGGGCG AGGCGCACGA GGACGAGCGG GCTGACTCCG TCTCCGACGA CGGTCCCGGT
GACGTGATCC GCGGCCGCGG CGCCTGCGAC GCGAAGGGAC CGCTCGCGGC GCTTCTCTCG
GGATTCCTCG CGGCCGATCC GGAACGCGGG CGGATCACGC TGGCGCTCAC CCCGGACGAG
GAGTCGCTGT CGCTCGGTGC GGCAGCGCTC ACCGGGCGCT CGCCCGGGAC CGAAGACCGG
CTCAACGGCG ACCTGTTCCT GGTCGGTGAG CCGACGAGTC TCGACGCCTG CACCGCCGCA
AAGGGGCGGT TTCAGGGGAC CGTGGAGCTG TCGGGAACCG CCGCCCACGC CGCGGAGTTC
GCGGGAGCGA ACGCAGTCGC GGCCGCCGAG GGCGCGCTCG CGGCGATCCG GACCTTCGAC
GACGGCGCCG ACGAACACCC GCAGCTCGGC CCGCCGAAGC TCACGCCGAC CGTCATCGAG
GGCGGCGGCG CAACGAATCA GGTGCCCGCG GACTGTGAGA TCACCGCCGA TCGACGGAGT
GTCCCCCCGG AGACAGCGGA GGGGTTCCGA TCGTCGCTTG CGGACGCCGT TCGGGAGTCG
ACACCGAAGG ACATCGGCGT CGCGGTCGCG CTGACGGACC GCGAGTCGCC GTTCTTCGAG
GCGTTCTCGA CGGACCCGGA CCACGAACTG GTGGGAGCGG TCGCGAACGC GGCCCGGATC
GCGGCCGACT CGACCGGAAT CCTGGCCGAC CGCGGCGGCG CTGTTCGTCC CTTCGGCGCG
GCGACGGAGG CGTCGTACTT CGCGCCCGCG CCGACGGTGG TGTTCGGCCC CGGTGACCTC
GCTGACAACG CTGGGGCGGT CGCGCACGCC GAGCGGGAGT ACGTCCGGGT CCGAGAGGTG
GAGGCGGCCG CGAAGACCGT CGAACGGTCG ATCGCGGCGC TACTCGGTGA CGCGGGTGCG
ACGGCAGCTG ATGACGCCGT CTAG
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| Protein sequence | MSGAAFDSVS FLEQAVQTPS HESVDEMREF VVETLDQFGA ESEVVAGGCV LAKKYSDAPG
EGPHLVLNTH LDTVTPHVPF ERGEAHEDER ADSVSDDGPG DVIRGRGACD AKGPLAALLS
GFLAADPERG RITLALTPDE ESLSLGAAAL TGRSPGTEDR LNGDLFLVGE PTSLDACTAA
KGRFQGTVEL SGTAAHAAEF AGANAVAAAE GALAAIRTFD DGADEHPQLG PPKLTPTVIE
GGGATNQVPA DCEITADRRS VPPETAEGFR SSLADAVRES TPKDIGVAVA LTDRESPFFE
AFSTDPDHEL VGAVANAARI AADSTGILAD RGGAVRPFGA ATEASYFAPA PTVVFGPGDL
ADNAGAVAHA EREYVRVREV EAAAKTVERS IAALLGDAGA TAADDAV
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