Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0656 |
Symbol | |
ID | 7401791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 672963 |
End bp | 673670 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643707722 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_002565328 |
Protein GI | 222479091 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.434782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0566937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCTCT TCGTAACGCT CGGCGCCGGC GTCGTCTTCG GGCTGGCGCT CGCGGCCCCG CCCGGACCCA TGAACGCCGT GATCGCCGAG GAGTCGGTGC TGCGCGGTCG CCTCGCCGGC TTCTGGGCCG GCCTCGGCGC TGCGACCGCC GATGCGATCT TCTTCGTGCT CGCGTACCTC GGCGTCGTCG CAGTCGTGGA GTCGTTCCCG CTGTTGCAGG GCGCTATGAT CGCGATCGGC GGCGTCCTCA TGCTGTACTT CGCTATCGGC GCGGCCCGCG GTGCCCGGGC GTCGTTCCGT CCGACCTCGG GCGCCGAGCC CACCGTCGCG GAGGGCAAGG GGTTCCGCAA GGCGCTGGTA CTTGCCCTGA CGAACCCGTA CCAAGTGCTG TTCTGGCTGA CGATCGGCGT CGGACTCCTC CGCCCCGGCG AGCTCGACGT GCTGGCCCGA CTCCCCGTCG TCGGCGAGGA TCTCGCCGGG ACGCTCGTGG TCGCCACCGG CTCTCCGGCG CTCATCGGCG GGTTCTTTTT GGGGGTGCTA ACGTGGATCG TGGGGTTCCC GACCGGGCTC GTCGCCGCCG AGCGCCGGAT CGAGACGTTC GCACCGATCG TCGCGGTCGG CTCCGCGGTC GTGCTCGCTG GGTTCGGCGT CTACTTCCTC TACGACGCGG CGACGACGCT GGCGGCACTG GCGACGCTGG GGGTCTGA
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Protein sequence | MSLFVTLGAG VVFGLALAAP PGPMNAVIAE ESVLRGRLAG FWAGLGAATA DAIFFVLAYL GVVAVVESFP LLQGAMIAIG GVLMLYFAIG AARGARASFR PTSGAEPTVA EGKGFRKALV LALTNPYQVL FWLTIGVGLL RPGELDVLAR LPVVGEDLAG TLVVATGSPA LIGGFFLGVL TWIVGFPTGL VAAERRIETF APIVAVGSAV VLAGFGVYFL YDAATTLAAL ATLGV
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