Gene Hlac_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0656 
Symbol 
ID7401791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp672963 
End bp673670 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content71% 
IMG OID643707722 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002565328 
Protein GI222479091 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.434782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0566937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCTCT TCGTAACGCT CGGCGCCGGC GTCGTCTTCG GGCTGGCGCT CGCGGCCCCG 
CCCGGACCCA TGAACGCCGT GATCGCCGAG GAGTCGGTGC TGCGCGGTCG CCTCGCCGGC
TTCTGGGCCG GCCTCGGCGC TGCGACCGCC GATGCGATCT TCTTCGTGCT CGCGTACCTC
GGCGTCGTCG CAGTCGTGGA GTCGTTCCCG CTGTTGCAGG GCGCTATGAT CGCGATCGGC
GGCGTCCTCA TGCTGTACTT CGCTATCGGC GCGGCCCGCG GTGCCCGGGC GTCGTTCCGT
CCGACCTCGG GCGCCGAGCC CACCGTCGCG GAGGGCAAGG GGTTCCGCAA GGCGCTGGTA
CTTGCCCTGA CGAACCCGTA CCAAGTGCTG TTCTGGCTGA CGATCGGCGT CGGACTCCTC
CGCCCCGGCG AGCTCGACGT GCTGGCCCGA CTCCCCGTCG TCGGCGAGGA TCTCGCCGGG
ACGCTCGTGG TCGCCACCGG CTCTCCGGCG CTCATCGGCG GGTTCTTTTT GGGGGTGCTA
ACGTGGATCG TGGGGTTCCC GACCGGGCTC GTCGCCGCCG AGCGCCGGAT CGAGACGTTC
GCACCGATCG TCGCGGTCGG CTCCGCGGTC GTGCTCGCTG GGTTCGGCGT CTACTTCCTC
TACGACGCGG CGACGACGCT GGCGGCACTG GCGACGCTGG GGGTCTGA
 
Protein sequence
MSLFVTLGAG VVFGLALAAP PGPMNAVIAE ESVLRGRLAG FWAGLGAATA DAIFFVLAYL 
GVVAVVESFP LLQGAMIAIG GVLMLYFAIG AARGARASFR PTSGAEPTVA EGKGFRKALV
LALTNPYQVL FWLTIGVGLL RPGELDVLAR LPVVGEDLAG TLVVATGSPA LIGGFFLGVL
TWIVGFPTGL VAAERRIETF APIVAVGSAV VLAGFGVYFL YDAATTLAAL ATLGV