| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0645 |
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| Symbol | |
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| ID | 7401780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 664669 |
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| End bp | 665313 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643707711 |
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| Product | blue (type 1) copper domain protein |
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| Protein accession | YP_002565317 |
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| Protein GI | 222479080 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3794] Plastocyanin |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03102] halocyanin domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.375984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.285724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGGC GGGAATTCGT GCGCACGGCC GGCGGTGCGA CCGCCGTGGC CGCGGCCGGT
GCCGGAGCGA CCGGAACGGT CGCCGCACAG GAGCTACAAC CGGTCTGGCC GAGCGCGGTC
ACGGGTGCAA ACCTCGGGAC GTACCAAGAC GCCCGCGGCG AGAGCGAGGT GACCGTACAG
GTCGGCGCGG GCGACAGTGG CCTCGCGTTC GACGCCACTA AGCTGTGGGT GGACCCCGGG
ACGACCATCA CGTTCGAGTG GACTGGGAAC GGTGGCGCAC ACAACGTGCA GAACGTCGAG
GGGCCGGCCA GCCTCGACAG CGGTGATCCG GTCGGCGAGG AGGGTGCGAC CTACGAGTAC
GAGACAAGCG AGGAGGACGT GGGGATAACC CACTACCACT GCGTGCCTCA CACCGCGGTC
GGCATGCACG CCGGCCTCGC CGTCGGTGAG GACATCGAGA CGGAGTCGGC CGGCGGCGGC
GGGAACACCG GGTGGCCGGA GAACATCGCC CACGTGGGCG TCCCGCTTCA CGCCCACTGG
GTCGGCATCG CCGCGATGCT CGGTATCTCG CTGACCTTCG TGTTTACCTT CTATCTGCTG
AAGTACGGTG AGTCGGCCCA CACCGGCCAC GGGGGTTCCC AATGA
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| Protein sequence | MKRREFVRTA GGATAVAAAG AGATGTVAAQ ELQPVWPSAV TGANLGTYQD ARGESEVTVQ
VGAGDSGLAF DATKLWVDPG TTITFEWTGN GGAHNVQNVE GPASLDSGDP VGEEGATYEY
ETSEEDVGIT HYHCVPHTAV GMHAGLAVGE DIETESAGGG GNTGWPENIA HVGVPLHAHW
VGIAAMLGIS LTFVFTFYLL KYGESAHTGH GGSQ
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