Gene Hlac_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0630 
Symbol 
ID7401765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp649693 
End bp650751 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content65% 
IMG OID643707696 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002565302 
Protein GI222479065 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3833] ABC-type maltose transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.142447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCC TCGGCTCCAC GCTCGCGCTG ATCCGCTCGA AGCTGATCGC GTTCGCGACC 
GCTCCGAAGC GGTTCTCCGT GCTGATCCAG CGGGCGATAT ACGACGTTCG CACGGGGAAG
CGCACCCCGT GGGACGTCGC CAAGAGCGTC CTGATGACTC TGTTCGGGCT CGCGATGGTG
CTCGTGCTGC TGTTCCCGCT GTTCTGGATC ACGAGCGCGT CGCTCGCGGA AGGGTCTCGG
TTGTTCAACA CGAGCGGGAT CTTCCCGGAC CCGTCGACAT ACAACCTCGA CGCGTACCGG
TGGGTGATCT TCGAGTCCGA CTTCTTCTTC GTCGACGGCG ACTGGGGGTA TCCCCAGCTC
GTCCTCGGCG GGGGGAGCGG GCTGGTCAGC TTCCAGTGGG CCGGTACCGA GACCGGTCCC
GGCGCCCTGT TCAACAGCCT CTACATCGTC AGCGTGACGC TCGCCGCCGG GTTCGGGATG
ATCGTCCCGG CAGCATATGC GTTTTCGCGC CGACAGTTCG TGGGTCGCAA GCGAATCCTC
TACGGCTACG TGCTGTTCAC GCAGATCGGC GCCGGGCTAT CGATCGCGAC GCTCGTGGCG
CTGTACTCGC TGTTCAGCAG CTACGGGCTC ACGAACAACC TGTTCATCCT CGGGCTGTTC
TACGCGGCGT CGGCGATCCC GTTCAACACG TGGCTGCTGA AGACGTACAT GGACAACATC
CCCATCTCCT ACGAGGAGGC GGCGATGGTC GACGGCGCGA GCTTCCTAGA CACGATCCGG
GAGGTCATCC TCCCGCTGAC GAAGCCGGGG CTCGCCGTCG TGCTCATCTT CGTCTGGCTC
GCCGGGTGGA ACGAGTTCAT CATCGCGCAG ACGCTGCTGC GCCCCGAGAA CTACCCGCTC
TCGGTGGAGC TGTACAACAT CGCGACCGAG GGGCGATTCT CGACGCCGTG GACGCGGTTC
GCGGCGTTCG CGAACCTGTT CGCGCTCCCC GTCGCGGTCG TCTACTTCGC GGCGCAGCGC
TCCGTCGAAG ACGGGCTCTC GTTCGGCGGG ATGGAGTGA
 
Protein sequence
MSLLGSTLAL IRSKLIAFAT APKRFSVLIQ RAIYDVRTGK RTPWDVAKSV LMTLFGLAMV 
LVLLFPLFWI TSASLAEGSR LFNTSGIFPD PSTYNLDAYR WVIFESDFFF VDGDWGYPQL
VLGGGSGLVS FQWAGTETGP GALFNSLYIV SVTLAAGFGM IVPAAYAFSR RQFVGRKRIL
YGYVLFTQIG AGLSIATLVA LYSLFSSYGL TNNLFILGLF YAASAIPFNT WLLKTYMDNI
PISYEEAAMV DGASFLDTIR EVILPLTKPG LAVVLIFVWL AGWNEFIIAQ TLLRPENYPL
SVELYNIATE GRFSTPWTRF AAFANLFALP VAVVYFAAQR SVEDGLSFGG ME