Gene Hlac_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0611 
Symbol 
ID7401747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp630011 
End bp631180 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content72% 
IMG OID643707677 
Productasparagine synthase 
Protein accessionYP_002565283 
Protein GI222479046 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0500916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC CTTCCTCCTC CGATCTGCGA GGCGCGTCAC CCGATCGCAT CTGCGACGCC 
CTCCGCGGCG GCGACCCCCT CCCCGGCGGG CGCGGCTTCG CCGGACTCCT CCGCGATCCC
CCGAACCGCG AGGGGCCGGT ACTTGTTCGT GACGTCCTCG GCCGCGAGCC ACTGTTCGTC
GAGCGGGGCG GCGCGGATCC GGCGTCTGGG GGTGATCCTA CTGACTCCGG TATCTGGAGC
TTCGATCGGA CCGACCTCGA CGACCCGGAA CCCGTTCCAG CCGGGACCGT CGCGTCGAGT
GCGGGGGCCG AGCGCGTCTG GTCGCTCCCG GACGAGGAGC CGGTCGACGC AGAGTCCGGA
CAGGCCGCGG TCGACGAGGC ACTCGGCGCT GTGCTCGGCG AGATCAAAAC GGAGGCGAAC
AGAAACGACC TCGCGGTCGC CTTCTCCGGC GGCATCGACT CCGGAGTCGT CGCTGCCGCG
GTCCCGGACG CGCCGTGTTA CGTCGCCGGC TTCGAGGGCT GTCACGACAT TGAGGCCGCT
CGCGAGGCCG CCACGGCGAT GGAACTTGAT CTCCGAGTCG TCGAGATCAC TCACGACGAC
CTCGTGCGCG CAGTCGGAGC GGTCGCCGCG GCGACCGGAC GGCGCAATCC GATGGACGTC
GCGATCGCGG TCCCGCTGTA TCTCGCGGCG GAGGCGGCCG CGACGGACGG TATCGATCGA
CTTGCGGTGG GACAGGGCGC CGACGAGCTG TTCGGTGGCT ACAGCAAGGT CGTCAACCCC
GCCGGCGACG ACCGCGTCGC AGCGGAGACG GTGCGGGGCG CACGGACTGA GACCGTCCGG
ACGCTTCCGG AACAGCTCGA TCGCGACGTG CTCGCGCTCC GCGCCGCCGG GGTCGAGCCG
GTCGCGCCGC TCTTGGACGA CCGGCTCGTT GCGGCCGCGC TCGCGCTGCC GGGCGAACTG
CTCGCGAGCG ACGACGAGCG CAAGGTCGCG CTCCGGCGGG CGGCAACCGA TCGAGTGCCG
GAGTCGGTCC GGACGGCCGA CAAGAAGGCG GTCCAGTACG GCACGTACGT CTCGCGAGAG
ATCGACCGGC TCGCGCGGCG GGCGGGGTTC AAGCGACGCA TGGACGACCA CGTCGGGCAG
TACCTCGACG CGCTGCTGGC GGAGCAGTAG
 
Protein sequence
MTTPSSSDLR GASPDRICDA LRGGDPLPGG RGFAGLLRDP PNREGPVLVR DVLGREPLFV 
ERGGADPASG GDPTDSGIWS FDRTDLDDPE PVPAGTVASS AGAERVWSLP DEEPVDAESG
QAAVDEALGA VLGEIKTEAN RNDLAVAFSG GIDSGVVAAA VPDAPCYVAG FEGCHDIEAA
REAATAMELD LRVVEITHDD LVRAVGAVAA ATGRRNPMDV AIAVPLYLAA EAAATDGIDR
LAVGQGADEL FGGYSKVVNP AGDDRVAAET VRGARTETVR TLPEQLDRDV LALRAAGVEP
VAPLLDDRLV AAALALPGEL LASDDERKVA LRRAATDRVP ESVRTADKKA VQYGTYVSRE
IDRLARRAGF KRRMDDHVGQ YLDALLAEQ