Gene Hlac_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0610 
Symbol 
ID7401746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp629023 
End bp629670 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID643707676 
Producthypothetical protein 
Protein accessionYP_002565282 
Protein GI222479045 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0471148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGG ACTGCGAGTC GTTCGTCCCC GGCTACGGCG ACGCCAACGC CGACTTTCAC 
GTAGTCGGCG ACCACCCCGG CGTCCACGGC GGCGTCGACG CGGGCATCCC GTTCACCGGC
GAACCGTGGT CGACCGCATT CCTCTCGGCG CTGGCCGAGG GAGGCCTGAT CGGGGGGTTC
GACGACTCGG CGGATGACCC AGCGACGATC GACGACTCGG CAGACGGCGC CGAGACCGCG
GACCCGATCG TCGCTGACCG GACGTTCTTC TCGTACCTCC ACATGTGCGT CCCCGACGGT
GTCCCGGACG AGGCGTCGTA CAACGACATG GAGCGGTTTT TCGACGCGGA GCTCCGGGCC
ATCGCGGCCC ACGTCCTCCT CCCGGTCGGC GCCCGCGCGA CCGACCACGT CCTCCAGCAG
TACACATCGC GTGCGCACAA GACCGAGATC GACATGGACG CGCTCCACGC CGAGGAGCTG
CTCGGGTCCG GGTGGCTCGT CCTCCCGATC AAAGACCCCG CGGAGTGGAC CGAAGGCGAC
GGCGACCGAC TCGCCGCGGC GCTCCGCGAG CTCCAATCGA CGGACTTCCG TCGCGAGAGC
GACCTCGGTC GCTTCATCGC GGGCAGTGAA CCGTATCTCG TCAGGTGA
 
Protein sequence
MRPDCESFVP GYGDANADFH VVGDHPGVHG GVDAGIPFTG EPWSTAFLSA LAEGGLIGGF 
DDSADDPATI DDSADGAETA DPIVADRTFF SYLHMCVPDG VPDEASYNDM ERFFDAELRA
IAAHVLLPVG ARATDHVLQQ YTSRAHKTEI DMDALHAEEL LGSGWLVLPI KDPAEWTEGD
GDRLAAALRE LQSTDFRRES DLGRFIAGSE PYLVR