Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0610 |
Symbol | |
ID | 7401746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 629023 |
End bp | 629670 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643707676 |
Product | hypothetical protein |
Protein accession | YP_002565282 |
Protein GI | 222479045 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0471148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCGG ACTGCGAGTC GTTCGTCCCC GGCTACGGCG ACGCCAACGC CGACTTTCAC GTAGTCGGCG ACCACCCCGG CGTCCACGGC GGCGTCGACG CGGGCATCCC GTTCACCGGC GAACCGTGGT CGACCGCATT CCTCTCGGCG CTGGCCGAGG GAGGCCTGAT CGGGGGGTTC GACGACTCGG CGGATGACCC AGCGACGATC GACGACTCGG CAGACGGCGC CGAGACCGCG GACCCGATCG TCGCTGACCG GACGTTCTTC TCGTACCTCC ACATGTGCGT CCCCGACGGT GTCCCGGACG AGGCGTCGTA CAACGACATG GAGCGGTTTT TCGACGCGGA GCTCCGGGCC ATCGCGGCCC ACGTCCTCCT CCCGGTCGGC GCCCGCGCGA CCGACCACGT CCTCCAGCAG TACACATCGC GTGCGCACAA GACCGAGATC GACATGGACG CGCTCCACGC CGAGGAGCTG CTCGGGTCCG GGTGGCTCGT CCTCCCGATC AAAGACCCCG CGGAGTGGAC CGAAGGCGAC GGCGACCGAC TCGCCGCGGC GCTCCGCGAG CTCCAATCGA CGGACTTCCG TCGCGAGAGC GACCTCGGTC GCTTCATCGC GGGCAGTGAA CCGTATCTCG TCAGGTGA
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Protein sequence | MRPDCESFVP GYGDANADFH VVGDHPGVHG GVDAGIPFTG EPWSTAFLSA LAEGGLIGGF DDSADDPATI DDSADGAETA DPIVADRTFF SYLHMCVPDG VPDEASYNDM ERFFDAELRA IAAHVLLPVG ARATDHVLQQ YTSRAHKTEI DMDALHAEEL LGSGWLVLPI KDPAEWTEGD GDRLAAALRE LQSTDFRRES DLGRFIAGSE PYLVR
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