Gene Hlac_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0562 
Symbol 
ID7401697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp583370 
End bp585127 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content71% 
IMG OID643707627 
Productpyruvate kinase 
Protein accessionYP_002565234 
Protein GI222478997 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAACG CCAAGATCGT CTGTACGATC GGTCCCGCGT CGGACAGCCG GGACGCGATC 
CGCGACCTCG CCGACGCGGG GATGTCCGTC GTCCGGCTGA ACGCCAGCCA CGGGACGACG
GCCCACCGCG AGGAGGTCAT CGAACGGGCC CGCGCCGTCG ACAACGAGAT CGACGACCCC
CTCGCGGTGA TGGTCGACCT GAAGGGGCCG GAGGTCCGGA CCGCCGAACT CGACGAGTCG
ATCTCGCTCG CGACCGGGTC CGAGGTGACC TTCGTCGAGG GCGACGACGC CACGCCCGAG
CGCGTCGGGC TCACCCACTC GATCGCGGCC GCCGGACCGG GAGACACCGT CCTCCTCGAC
GACGGGCGGA TCGAGTGTCG GGTCGAGCGC GTCGACGGCG AGTCGGTCGT CGCCACCGTC
GTCTCCGGCG GGAAGCTCAG CTCGCGGAAG GGCGTCAACC TCCCCGGCGT CGCCATCGAC
GTCGACCTCA TCACCGCGGA GGACGAGGCC GAACTCGACC TCGCGGCGCG GACGAACGCC
GACTTCGTCG CGGCCTCCTT CGTGCGAAAC GCCAACGACG TCTACCGGAT CGCAGACGCG
CTGGAGGAGC GCGGCGGCGA CGACATCCCG ATCGTCGCGA AGATCGAGCG GGCGGGCGCG
GTCGAGAACC TCGACGGGAT CATCGACGCC GCCGACGGCG TGATGGTCGC GCGCGGCGAC
CTCGGCGTGG AGTGCCCGCT GGAGGACGTC CCCGTCATTC AGAAGCGAAT CATCCGAAAG
TGCGTCAACG CGGGCGTTCC CGTCATCACG GCGACGGAGA TGCTCGACTC GATGGTCTCC
TCCCGCCGAC CGACGCGTGC GGAGGCGTCC GACGTGGCGA ACGCGGTCCT CGACGGGACC
GACGCCGTAA TGCTGTCGGG CGAGACCGCA ATCGGCGACG ACCCCGTCAA CGTCGTCGAG
ACGATGGACC GGATCGTCAG GCAGGTCGAG TCCAGCGACG AGTACGCGGA GACGCGCGAA
CAGCGCGTTC CGACTGCCGC AGAGGGCTCG CGAACCGAGG CGCTGGCCCG CTCCGCACGC
TACCTCGCGC GCGACATCGG CGCCTCCACG GTGGTCGCCG TCTCGGAGTC CGGGTTCACG
GCCCGCAAGA CGGCGATGTT CCGGCCGGGC GTCCCCGTGG TCGCGACGAC GCCGAGCGAC
CGCGTCCGGC GCCAGCTCGC GCTCTCGTGG GGAGTTCGCC CCGTGCTGAC CGAGTACGCC
CACGACATGG AGACGATCCT CGACAACGCG GTCGACGCCG CGCTCGACAC CGGCGGAGCC
GCCTCCGGCG ACACGCTCGT CGTGCTCTCC GGCATGCTGA CCGAGTTCGA AGGGACGAAC
ACGACGAACA CGCTCAAGGT CCACGTCGCC GCTGAGACGT TGGTGACTGG CAAGGCGGTC
GTCGCTGGCC GCGTCGCGGC TCCGGTGTAC CGCACCGCCG ACGGCGACCT GAGCGACGTT
CCCGAGGGGT CAGTCGTCGC GCTCGGCCCG AGCTTCGAGG GCGAATTCAC CGGCGACCTC
GACGCAATCG CCGGGATCGT CGACGCCCGC GAGGGGATGA CGGGGTACCC CGCCGTAGTC
GCTCGCGAAC TCGGCGTCCC GATGGTCTCA GGCGCGCGGC TCCCCGAGAG CGTGACCGAC
GGGACCGTGG TGACGGTCGA TGGCGAGCGC GGCGTGGTCT ACGACGGCGA CGTGATCGCG
GCGACACAGA AGCGGTAG
 
Protein sequence
MRNAKIVCTI GPASDSRDAI RDLADAGMSV VRLNASHGTT AHREEVIERA RAVDNEIDDP 
LAVMVDLKGP EVRTAELDES ISLATGSEVT FVEGDDATPE RVGLTHSIAA AGPGDTVLLD
DGRIECRVER VDGESVVATV VSGGKLSSRK GVNLPGVAID VDLITAEDEA ELDLAARTNA
DFVAASFVRN ANDVYRIADA LEERGGDDIP IVAKIERAGA VENLDGIIDA ADGVMVARGD
LGVECPLEDV PVIQKRIIRK CVNAGVPVIT ATEMLDSMVS SRRPTRAEAS DVANAVLDGT
DAVMLSGETA IGDDPVNVVE TMDRIVRQVE SSDEYAETRE QRVPTAAEGS RTEALARSAR
YLARDIGAST VVAVSESGFT ARKTAMFRPG VPVVATTPSD RVRRQLALSW GVRPVLTEYA
HDMETILDNA VDAALDTGGA ASGDTLVVLS GMLTEFEGTN TTNTLKVHVA AETLVTGKAV
VAGRVAAPVY RTADGDLSDV PEGSVVALGP SFEGEFTGDL DAIAGIVDAR EGMTGYPAVV
ARELGVPMVS GARLPESVTD GTVVTVDGER GVVYDGDVIA ATQKR