| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0544 |
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| Symbol | |
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| ID | 7401679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 565736 |
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| End bp | 568012 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643707609 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002565216 |
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| Protein GI | 222478979 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAAC CCGGCCCGCC GCGCACGACG AGTGTCGGCG AATCCGTCGA GCTGGCCCCG
CGGAGCCCCG ATCCCGACGG GACCTACGAG TGGACCCTCC GCGACGCGCC GGCCGAGAGC
GACGCGCGCG TGGACGGGCA GCCAGTGAGC GGGAGCAGTG ATGACGGGGA ACTCCTCGTT
CCCGGCGAGA CGAGCCGACC GGACGCACCG GTCGTCCACC TCCGTCCCGA CGCCCCCGGA
ACGTACGTCC TGACGCTCGA CGCCCCGGAC GGAACGCACC GCCAGCGGGT GCGCGCGTAC
CCCGACGAGC GGCAGTCGGT CGAACTTCGC GTCCCCGCCG CGGACCTCCC GGTGGACGAC
GGCGACGTGG ACCGCGTCTC GGTGATGTGG CCCCACAACG ACCGCCTGCT CGCGCGCGAC
CGTCCCGAGC GCGACGGCGA CGATTGGATC TACGAGGTCC AGATTCCGCC GGGTCGCCAC
GGGTTCAGCT TCGTCGCCAA CGACGACCCC GGCAACGAGC ACCGCGACGA GGTGACCGTG
CCGGGTCCGG GGCGCCCGCG CGTCTCGATG TCGGCGACCG TCGTCGAGGG TGGGGAGGGA
GAGGGGGACG CCGACGCCTC ATCCGTCCGG ATCGTTGCCG ACACCGAGGC GCCGCCCGAC
CTCGACGGCG AGGGCGATGC CGGGAGACGC ACCGGCGAGT CCCCCGTCGC CGTCGACTTC
CTCGTCGACG ATCGCGATGC GGACCCCGAG ACAGTCGCGC GGATCGAGTC GCTGGCGGCG
GGCGACACAC TCACGATCCC GCTTGCGGAG CTTTCCGACG ACCTCTCTGG TGGGATCCGG
GTCCACGCAG TCCCGAACGC CGACCGGTAC GGCGCGGCGG AGACGATCCG GATCGAGCGG
GACGAAGAGG GGGCCGTGGG CGCCGGCGAG GGCGGCTCCG TGACCGTTTC CGACCCCCAT
GCACCCCCCG AGTGGGCCGA CTCGCCGACG ATCTACGAGG TGTTCGTCCG GTCGTTCGCC
GGCGACACGC TCCCGACGAC GTTCCGCGAG ATCGAGCGTC GAGTCCCCTA CATAGAGAGT
CTCGGCGTCG ACACGCTCTG GCTCACGCCC GTGCTCGCCT CGCCGACGGA ACACGGCTAC
CACGTCACCG ACTACTACGA CACCGCCGCC GACCTCGGCT CGCGCGAGGC GTTCGAGTCC
CTGGTCGCGG CCTGCCACGA GGCGGGGATC AAGGTCGTGT TCGATCTGGT GATCAACCAC
ACCTCCCGCG ATCATCCCGT CTTCCAGATG CACGCCGCCG GCGTCGACGC GTACGCCGAT
CACTACCGCC GGGCTGACGG CGACTTCGAC GTGACAGACA CCGACTGGGC GGAGCTGGCA
GCGGGCGATA TGCCGGAGTA CTACTTCAAC TGGCGCCGGA TCCCGAACCT CAACTTCGAC
AGCCCGGCGG TCCGCGAGTG GCTGCTCGAC GTGGTCGACG AGTGGAGCGC GGTCGTCGAC
GGCTTCCGCG CCGACGTGGC GTGGGGCGTG CCCCACGGCT TCTGGAAGGA GGTCAGTGAG
CGCGTGCCCG ACGACTTCCT CCTGCTCGAC GAGACGCTCC CCCACGACCC CTTCTACGGC
GAGGGGGAGT TCGACGTCCA CTACGACACC TCGCTGTACG ACGCGCTCCG GGATGTCGGG
GCGGGCGACG CGCCCGCGGA CGCGATCGCC GACGCGTTCG CCCGCGCCGA GTGGCTCGGG
TTCGACGACC CGGGCGTCCA GATGCGCTAC GTCGAGAACC ACGACGAGGA GCGCTACCTC
GCCGAGTACG GGCGGGAGGC GCTGAAGGCG GCCGCCGCGA CCGTCTTCAC CCTCCCCGGC
GCGCCGATGA TCTACGCCGG ACAGGAGCGC GGCAACGAGA CGTACCGCGG ACCCGTACGC
TGGCACGACG GCGACAACGA CCTCACCGAC TTCCACCGCG ACCTCGCCGC GCTCCGCGAG
CGCGAGCCGC TCCTCCGGGA CGGCGCCGTC GACTTCGAGG GCCGCGCCGC TGACGTGTCG
GTCGTCGACG GCGATCCCGA GCGCGTAACG GCGTACGAGC GAACGCCGGC GACGGACGAT
TTCGAGGGCG ACGATCACGA CGCGGACCCC GACCCGCTCC TCGTCGTCGT CAACTTCGCA
GACCGGCCGG TGACGGTGGA GGTTCCGGCG GGGTTCGAGA CCGACCTGTT CGCGGGTGAC
GGGTCTGGCG CGGTCGACGA GGGAGTCACG GTCGAGAGCG TCGCCGTCCT CCGGTAG
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| Protein sequence | MHEPGPPRTT SVGESVELAP RSPDPDGTYE WTLRDAPAES DARVDGQPVS GSSDDGELLV
PGETSRPDAP VVHLRPDAPG TYVLTLDAPD GTHRQRVRAY PDERQSVELR VPAADLPVDD
GDVDRVSVMW PHNDRLLARD RPERDGDDWI YEVQIPPGRH GFSFVANDDP GNEHRDEVTV
PGPGRPRVSM SATVVEGGEG EGDADASSVR IVADTEAPPD LDGEGDAGRR TGESPVAVDF
LVDDRDADPE TVARIESLAA GDTLTIPLAE LSDDLSGGIR VHAVPNADRY GAAETIRIER
DEEGAVGAGE GGSVTVSDPH APPEWADSPT IYEVFVRSFA GDTLPTTFRE IERRVPYIES
LGVDTLWLTP VLASPTEHGY HVTDYYDTAA DLGSREAFES LVAACHEAGI KVVFDLVINH
TSRDHPVFQM HAAGVDAYAD HYRRADGDFD VTDTDWAELA AGDMPEYYFN WRRIPNLNFD
SPAVREWLLD VVDEWSAVVD GFRADVAWGV PHGFWKEVSE RVPDDFLLLD ETLPHDPFYG
EGEFDVHYDT SLYDALRDVG AGDAPADAIA DAFARAEWLG FDDPGVQMRY VENHDEERYL
AEYGREALKA AAATVFTLPG APMIYAGQER GNETYRGPVR WHDGDNDLTD FHRDLAALRE
REPLLRDGAV DFEGRAADVS VVDGDPERVT AYERTPATDD FEGDDHDADP DPLLVVVNFA
DRPVTVEVPA GFETDLFAGD GSGAVDEGVT VESVAVLR
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