Gene Hlac_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0541 
Symbol 
ID7401676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp562111 
End bp563358 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content68% 
IMG OID643707606 
Producthypothetical protein 
Protein accessionYP_002565213 
Protein GI222478976 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0649388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAG ACGACGCGGT ACGCAGAGCA TCGACCCGAA GAGCGTTCGC CAAGTACGGC 
GGCACTGTCG CTCTCGGCGG CTTACTCGCC GGTTGCACCG ACGGCGGCGG CGCCGGTTCG
TCCGACTCCG ATTCGCCCGA CGCCGACACG ACCGACACCG GTTCGACCGA CGACGACCGG
GCGGAGTCAC AGACCGAGGA CGCCGCCGAT GCGAGCTACA CGGCGTCGAT CTCGCCGATG
GGCGAGGTGA TCTTCGAGTC GCCGCCGGAG ACGGTGTTCA CGCGGCTCAC CCATCACGCG
GACATGGCGT TCGCGCTGGG CCGGGGGAAC GACGTCACGG CGCTGCACGC GCCCGACTAC
TACGACGGGC TCTGGAACCA GTACGTCGAG CGCCTGCCGG GCGTCTCGCT CGACTGGTCG
GGACTCTACT CCTCGTGGCA GCCGGACAAG GAGAAGCTGT ACGAGCTCGA CAGCGACATC
CACCTCGCGG ACCCGGCGTG GGTGACGCAG GTCGAGGGTT GGGAGCGGTC GGACATCGAC
GAGATCGCCG AGAACGTCTC GCCGTGGTTC GGCAACTCCC TCAGCGACCG GCATCAGGAG
CCCGCCGAGG AGTGGGCCGA CGGCTACCAG TACTACGGGC TGTGGGAGCA GTTCGAAATC
GTCGCCGAGG CGTTCCGAGA GCGCGAGCGC TACGAAGCGC TCGCAGCGGT CCGCGAGGAA
CTCCTGTCGA CGATCGAGGA CAACCTGCCG CCGGAGGAGG AGCGCCCGAC CGCGATCATG
ATCGCCGCCG CCGACATCGA GAGCATCTAC GCGTACACCC TGAGCAACCC CGGGTTCCTC
ACGTCACACA CACGCCCGCT CGGGCCGCGA GACGCGTTCG AGGGGAGCGT CGAGTCCGGC
ACCGTCGTCG ACTTCGAGAC GATCCTCGAG GCGGACCCCG ACGTAATCTT ATACCTCGGC
GGTATGGAGC CGGGAACGGA CATGGCTGGG CGGCGCACCG CTTTCGAGGA GGACGCCGTC
GGCTCTGAGA TCACGGCGGT TCAGAACGAC CGCGTCCATC CACAAGGCGC CCGGTATCAG
GGACCGATCT TGAACCTCTT CCAGCTGGAG ATGACGGCGA AGCAGCTCTA CCCCGACGCG
TTCGGCGCGT GGCCGCGGTA CGAGTCCGGC CCGTATCCGG AGATTCCGAC CGACGAACAG
CTGTTCGACC GCGAGCGCGT CGCGGACGTC ATCAACGGGG ACCCGTAG
 
Protein sequence
MPRDDAVRRA STRRAFAKYG GTVALGGLLA GCTDGGGAGS SDSDSPDADT TDTGSTDDDR 
AESQTEDAAD ASYTASISPM GEVIFESPPE TVFTRLTHHA DMAFALGRGN DVTALHAPDY
YDGLWNQYVE RLPGVSLDWS GLYSSWQPDK EKLYELDSDI HLADPAWVTQ VEGWERSDID
EIAENVSPWF GNSLSDRHQE PAEEWADGYQ YYGLWEQFEI VAEAFRERER YEALAAVREE
LLSTIEDNLP PEEERPTAIM IAAADIESIY AYTLSNPGFL TSHTRPLGPR DAFEGSVESG
TVVDFETILE ADPDVILYLG GMEPGTDMAG RRTAFEEDAV GSEITAVQND RVHPQGARYQ
GPILNLFQLE MTAKQLYPDA FGAWPRYESG PYPEIPTDEQ LFDRERVADV INGDP