Gene Hlac_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0538 
Symbol 
ID7400419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp558941 
End bp559912 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content72% 
IMG OID643707603 
Productthioredoxin reductase 
Protein accessionYP_002565210 
Protein GI222478973 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.677073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG GCGTCGATCG CGACGCGGTC GTCACGGGTC TTGACTACGA GGCGGTCGTG 
GTCGGCGGCG GCCCCGCCGG CTGCTCGGCC GCCGTCTTCC TCGCCCGCGA GGGGATCGAC
GTCGCCATGT TCAACCGTGG TCGGTCGTCG ATCGCGCGCT GTGCGCATCT GGGGAACTAC
CTCGGCTTCC CCGGCGGGAT CGACGTCGAG ACGTTATACG ATCTGATGCA CGACCACGTC
GAGCGCGCGA GTGGCGAGCT CGTCGGCGAC CTCGTCGAGT CAGTCGAATC GCGGGCGACT
GACGACACGG AGGAAGCGCG CTTCCGCGTC ACCCCGCAGG AGGGCGAGCC GGTCGCCACC
CGCTGCGTGG TAGCGGCGAC CCGATACGAC GGGGAGTACC TCCGTGGGCT CGACGACGAC
GCGGCGATGT TCGAGACCCA CGACCACGGC GGCGAGACTC GCGAGCACTT CGATCGGGAG
TACGCCGATC CCGACGGAAC GACGCCGATC GACGGGCTCT ACGTCGCCTC GCCCTCCGAG
GCCGACCGAC AGGCGATCAC GGCGGCCGGA CGCGGTGCCC GCGTCGCCCG GCGAGTCGTC
ACCGACGCGC GAATCGACGA TGGCTGGTGG CCCGCGGCGG CCGAGGACGT CGACTGGGTA
CGCCGTGAGG CCGAGCGCGA GGAGGAGTGG GCGGACCGCG ATCGGTGGGT CGAGTGGTTC
GACCAGCGCC ACGCCGACGC CCCGGTCGAT CCGGAGTCGG AGCGGTTCGC GCGCGTTCGC
GAGGCCGCTA TCGACGAGAC GCTGGCGTCG TACGTCGACG CCGACGAGGC CGAGGAACAA
GCGGCCGAGG GTGGGCGCGC GCTCGCCGAT CACCTCGACC CGCGCGCCGT CGTCGACGCA
CACGGCGCCG AGGCCCTGCT CGACGCAATG GATGACGAAG ATATCGCCGC GTACGGCGCG
AGGGCGCGAT GA
 
Protein sequence
MSGGVDRDAV VTGLDYEAVV VGGGPAGCSA AVFLAREGID VAMFNRGRSS IARCAHLGNY 
LGFPGGIDVE TLYDLMHDHV ERASGELVGD LVESVESRAT DDTEEARFRV TPQEGEPVAT
RCVVAATRYD GEYLRGLDDD AAMFETHDHG GETREHFDRE YADPDGTTPI DGLYVASPSE
ADRQAITAAG RGARVARRVV TDARIDDGWW PAAAEDVDWV RREAEREEEW ADRDRWVEWF
DQRHADAPVD PESERFARVR EAAIDETLAS YVDADEAEEQ AAEGGRALAD HLDPRAVVDA
HGAEALLDAM DDEDIAAYGA RAR