Gene Hlac_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0507 
Symbol 
ID7400388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp527205 
End bp527669 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content70% 
IMG OID643707572 
ProductProtein-tyrosine phosphatase, low molecular weight 
Protein accessionYP_002565179 
Protein GI222478942 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.828394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAT CCACCGACAC CGCGGACGAC GAAGCGGCCG ACACGACGAC TACCCTCACG 
TTCATGTGCG TCCGCAACGC CGGGCGGAGC CAGATGGCGA CGGCGTTCGC GGAGCGCGAG
CGCGACCGGC GCGGCCTCGG CGACCGCGTC GAGATCGTAA CGGGCGGGAC GATGCCCGCG
GACAGCGTTC ACGACGTGGT CGTCGAGGCG CTCGCGGAGG TCGGTCTCGA CGTGAACGGC
CGGACGCCGC AGCACGTCTC CGACGAGACG CTCGCCGCGT CCGACTTCGC CGCCACGATG
GGCTGCTCGA CGCTCGAATT GGACGGCGTC GACACCGACG ACTGGGACCT CGACGACCCG
GGCGAGCGCC CGATCGAGGA GGTACGTCCG ATCCGCGACG AGATCGAGCG CCGCGTGATC
GCGGTCTTCG ACGAGCGGTT CGGCGAGTAC GACGGCGAGC AGTAG
 
Protein sequence
MTQSTDTADD EAADTTTTLT FMCVRNAGRS QMATAFAERE RDRRGLGDRV EIVTGGTMPA 
DSVHDVVVEA LAEVGLDVNG RTPQHVSDET LAASDFAATM GCSTLELDGV DTDDWDLDDP
GERPIEEVRP IRDEIERRVI AVFDERFGEY DGEQ