| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0456 |
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| Symbol | |
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| ID | 7401074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 474244 |
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| End bp | 475068 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643707520 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002565128 |
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| Protein GI | 222478891 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.637714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTGT ACGGACTGAT CGGGAACCCG GTCGGCCATT CGCTGTCGCC GCCGATGCAC
GAGGCCGGCT ACGGGACGCT CGGGATCGAC GCGCGCTACG TGACGTTCGA GCCGGCCCCC
GACGACGCCG TCGCGGCGAT CGGGGGGGCC GGTGCGCTCG GGGTCGCCGG GCTCAACGTC
ACGGTCCCGT TCAAGCAGGA CGCGTTGGAC GCGGTGGATC CCGCGCCCCT CGCCGAGCGG
ATCGGCGCGG TCAACACGGT CGACTTCGGG CCGCTCCGCG CCGGCGACGC TGACCGCCCA
CGAGGCCACA ACACCGACGC AGCGGGCGTA AAACGGGCTT TTTCTCATCA CGATATCGAA
CTCGCGGGAC GGGACGCGGT CGTCGTCGGA GCGGGCGGCG CGGGGCGGGC CGCCGCGTTC
GCGCTGGCCG ACGCGGGCGC GACGGTCCAC GTCGCGAACC GCACCGCGGA GCGGGCGGTC
GACCTGGCCG ACGCGGTCCC CGGCGCGACC GGCGGGGGGC TCGACGATCT CGGCGACCGC
ATCGCCGGCG CCGACGTGCT GGTCAACGCC ACCAGCGTGG GCATGGACGA GCCGGAGGCG
ACGCCCGTTC CGGCGGACCA CCTCCACGGC GACCTCGCCG TGCTCGACGC GGTGTACGCG
CCGATCGAGA CGCGACTCCT GCGGGAGGCG GCCGCCGCGG GCGCGACGAC GATCGACGGG
GCGTGGATGC TACTGTTCCA AGGGGTCGAG GCGTTCGAAA TCTGGACCGG CGCCGACGCG
CCGGTGGAGG CGATGAACGC GGCGCTGCGG GCCGAGTTGG AGTGA
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| Protein sequence | MDVYGLIGNP VGHSLSPPMH EAGYGTLGID ARYVTFEPAP DDAVAAIGGA GALGVAGLNV
TVPFKQDALD AVDPAPLAER IGAVNTVDFG PLRAGDADRP RGHNTDAAGV KRAFSHHDIE
LAGRDAVVVG AGGAGRAAAF ALADAGATVH VANRTAERAV DLADAVPGAT GGGLDDLGDR
IAGADVLVNA TSVGMDEPEA TPVPADHLHG DLAVLDAVYA PIETRLLREA AAAGATTIDG
AWMLLFQGVE AFEIWTGADA PVEAMNAALR AELE
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