Gene Hlac_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0446 
Symbol 
ID7401064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp462095 
End bp463015 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content73% 
IMG OID643707510 
ProductDNA binding protein 
Protein accessionYP_002565118 
Protein GI222478881 
COG category[S] Function unknown 
COG ID[COG1992] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.407825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTTCA TCGAGGAGGT CGTCGTCGAC GAGTTCCTCC CGACGGTGCG CTCGATGCTG 
GCGGAGGACC TCCGCGAGCG CGGCTTCACC CAGCACGAGG TCGCCGACGC GCTCGGCATC
TCGCAGTCCG CGGTCTCGAA GTACGCCCAC GGCGACGTGG CCCGCCACGA CCGGATCGTC
GCCGATGAGC GCGTTCGCGA ACTCGTCGAG CGCGTGGGCG AGGGGCTCGC GACGGGGGAG
ATGACACCGG TCGCAGCCCT CGCCGAGATC GAGGTGCTGA TCCGCCGGTT GGAGGAGGGC
GACCTCCTCG CGGACCTCCA CGAGGAGGCG ATGCCCGCGC TCGCCGACGC CGAGGTGGAG
TTCGCCGTTC ACGACCCGGA CAGCGGGCTC CGCGAGCGCG AGCGCGTCCT CTCCTCGGTC
CGGCGCGGGC TCCGCACCCT GACGAACGCC TCCGGGTTCG CCGGGCTCAT CCCGAACGTC
GGTGCCAACG TCGCCGAGTG TCTCGACGAC GCGCGGACGG TCGACGACGT GGCGGCCGTG
CCCGGTCGCC TCGTCGACGT GAAGGGACGG GCGATGGTCC CGGGCGAGCC CGAGTTCGGC
GTGAGCGAGC ACGTCGCGAC GGTCCTGCTC GCCGCGCGTG AGGCGGGCGC GACCGCTCGC
GGCGCGGTGA ACGTGCGGTA CGCCCCCGGA ACCGTCGAGG CGCTCGCCAC CGACCATCCG
ACGGTGGAGT TCGACCCCGA GCGACCGACC CGGGAGGCGG TCGTCGATGC GGTCGCCGAC
GCGGAGCGCT CGGGCGGCGA CAGCGCCGAC AGCGACACCC TCGTCCTCTA CCAGACGGGC
GCGGTCGGCG TCGAGCCGAT CGTCTACGTG CTCGCGCCGA CCGCCGCGGA CGCGGCCCGA
ATCGTTCGCG GGCTGGTCTG A
 
Protein sequence
MRFIEEVVVD EFLPTVRSML AEDLRERGFT QHEVADALGI SQSAVSKYAH GDVARHDRIV 
ADERVRELVE RVGEGLATGE MTPVAALAEI EVLIRRLEEG DLLADLHEEA MPALADAEVE
FAVHDPDSGL RERERVLSSV RRGLRTLTNA SGFAGLIPNV GANVAECLDD ARTVDDVAAV
PGRLVDVKGR AMVPGEPEFG VSEHVATVLL AAREAGATAR GAVNVRYAPG TVEALATDHP
TVEFDPERPT REAVVDAVAD AERSGGDSAD SDTLVLYQTG AVGVEPIVYV LAPTAADAAR
IVRGLV