Gene Hlac_0381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0381 
Symbol 
ID7400998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp401866 
End bp402453 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content72% 
IMG OID643707445 
Productprotein of unknown function DUF99 
Protein accessionYP_002565054 
Protein GI222478817 
COG category[S] Function unknown 
COG ID[COG1628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.162805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCGC CGAGCCGGAC GCTCGGTATC GCCTTCTCAG ACGATGACCG AACCAGTCGC 
CTAGCTGGGG CTGTCGTCAG AGCCGACGGC ACCCTCGACG GGCTCGGGTT CGAGACCTGC
ACCGTTGGCG GGACCGACGC GACCGACGCC GCGATCGCGC TCTTCGACCG GCTGAGGCGC
GAGGATGTGC GCCATGTCGC CGTGGCGGGA ATCGCGCCCG CGTGGTTCAA CCTCCTCGAC
CTGTCGCGGC TTCACGAGGC TCTCGACCGA CCGGTGTACG CCGTGAGCTA CGAGGAGAGC
CCCGGGCTCG AACCGGCGCT CCGCGAGGCG TTCGACGGCG AGGCGCTCGC GCGGCGGCTC
GACACGTATC GGTCCCTGCC GCCTCGGGTT CGGGTGGAGC GCGACGAGTG GAACTCGGCC
GCGAGCGATG CCCCGGAACC ACTGTTCGTC CGCGCGGTCG GGATCGACGT CGACGAGGCC
GCCGCCGCGG TCTGCGGGTT GGTCCGCGAG GGGTTCCGCC GGCCGGAGCC CCTCCGGATC
GCCGCAATCG CGGCGAGCGC GCACCGGGAG GCGACGAGGG AGCGGTAG
 
Protein sequence
MTPPSRTLGI AFSDDDRTSR LAGAVVRADG TLDGLGFETC TVGGTDATDA AIALFDRLRR 
EDVRHVAVAG IAPAWFNLLD LSRLHEALDR PVYAVSYEES PGLEPALREA FDGEALARRL
DTYRSLPPRV RVERDEWNSA ASDAPEPLFV RAVGIDVDEA AAAVCGLVRE GFRRPEPLRI
AAIAASAHRE ATRER