Gene Hlac_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0352 
Symbol 
ID7399744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp372507 
End bp373217 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID643707416 
Productprotein of unknown function DUF502 
Protein accessionYP_002565026 
Protein GI222478789 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.219023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.241205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGT GGAAACGCGA TTTCGCCAGC GGCCTCATCG TGCTGGCTCC CCTGTTGGTG 
CTGCTTCTCG TCCTCCAGTG GATCTACCAG TACATCGCAT CGATCCCGCT GATCGAGGGG
CTCCAACCGG CGATCATTCC GGCGCCGCTG GAGCCGATCT CGCGGGTAAT CATCGCGATG
GCGGTGTTCG CGACGGTCGT CCTCGCGGTC GGGTACTTCA TGCGAACGAC GTTCGGCCGG
CTGGCAGAGT CAGCCGTCGA CGGCGCGATA AATCGGATTC CGGCGCTGCG TGTGGTGTAC
AATGCCTCGA AGCTCGCGAT CGAGACGGCC GTCTCCGGAA CTGACGAGCT ACAGAGCCCC
GTCTACATCG AGACGTGGCC GGGGATCCGC ATGACCGCGT TCCGGACCGG GAAGAAGACC
CGCGACGGGA AAATCGTCCT GTTCATGCCG ACCGCGCCGA ACATCACCAC CGGGTTCGTC
ATCGAGGTCG AGCCGGAGCG CATCGAGGAG ACCGGGGAGA CCGTTGAGGA GGGGATGACG
CGCGTCCTCT CGGCCGGGTT CGCCGAGTCC GCGCATCAGG TCCCCGTCGA GGAGGAGCGA
CCGCCCGAGG GGACCACCGG GCAGCCTGGG GGCGTCGGCG GCGTCCGCAC CGACGGAACC
CCGGGTGAGT CCGACCGTCC GTCCACGGAC GGAGGCGGTG AAGGCGACTA A
 
Protein sequence
MSTWKRDFAS GLIVLAPLLV LLLVLQWIYQ YIASIPLIEG LQPAIIPAPL EPISRVIIAM 
AVFATVVLAV GYFMRTTFGR LAESAVDGAI NRIPALRVVY NASKLAIETA VSGTDELQSP
VYIETWPGIR MTAFRTGKKT RDGKIVLFMP TAPNITTGFV IEVEPERIEE TGETVEEGMT
RVLSAGFAES AHQVPVEEER PPEGTTGQPG GVGGVRTDGT PGESDRPSTD GGGEGD