Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0352 |
Symbol | |
ID | 7399744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 372507 |
End bp | 373217 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643707416 |
Product | protein of unknown function DUF502 |
Protein accession | YP_002565026 |
Protein GI | 222478789 |
COG category | [S] Function unknown |
COG ID | [COG2928] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.219023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.241205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGT GGAAACGCGA TTTCGCCAGC GGCCTCATCG TGCTGGCTCC CCTGTTGGTG CTGCTTCTCG TCCTCCAGTG GATCTACCAG TACATCGCAT CGATCCCGCT GATCGAGGGG CTCCAACCGG CGATCATTCC GGCGCCGCTG GAGCCGATCT CGCGGGTAAT CATCGCGATG GCGGTGTTCG CGACGGTCGT CCTCGCGGTC GGGTACTTCA TGCGAACGAC GTTCGGCCGG CTGGCAGAGT CAGCCGTCGA CGGCGCGATA AATCGGATTC CGGCGCTGCG TGTGGTGTAC AATGCCTCGA AGCTCGCGAT CGAGACGGCC GTCTCCGGAA CTGACGAGCT ACAGAGCCCC GTCTACATCG AGACGTGGCC GGGGATCCGC ATGACCGCGT TCCGGACCGG GAAGAAGACC CGCGACGGGA AAATCGTCCT GTTCATGCCG ACCGCGCCGA ACATCACCAC CGGGTTCGTC ATCGAGGTCG AGCCGGAGCG CATCGAGGAG ACCGGGGAGA CCGTTGAGGA GGGGATGACG CGCGTCCTCT CGGCCGGGTT CGCCGAGTCC GCGCATCAGG TCCCCGTCGA GGAGGAGCGA CCGCCCGAGG GGACCACCGG GCAGCCTGGG GGCGTCGGCG GCGTCCGCAC CGACGGAACC CCGGGTGAGT CCGACCGTCC GTCCACGGAC GGAGGCGGTG AAGGCGACTA A
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Protein sequence | MSTWKRDFAS GLIVLAPLLV LLLVLQWIYQ YIASIPLIEG LQPAIIPAPL EPISRVIIAM AVFATVVLAV GYFMRTTFGR LAESAVDGAI NRIPALRVVY NASKLAIETA VSGTDELQSP VYIETWPGIR MTAFRTGKKT RDGKIVLFMP TAPNITTGFV IEVEPERIEE TGETVEEGMT RVLSAGFAES AHQVPVEEER PPEGTTGQPG GVGGVRTDGT PGESDRPSTD GGGEGD
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