Gene Hlac_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0345 
Symbol 
ID7399737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp366252 
End bp366806 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content69% 
IMG OID643707409 
Productheat shock protein Hsp20 
Protein accessionYP_002565019 
Protein GI222478782 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.123231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCC GCGATCGATT TACCGAGATA GAAGACCTGA TCGAACGGAT GGGACGGGAG 
TTCGAGGAGC TCGGCGGCAC GCTCGACGCG CCGGGGCCCG GGGTCCCCGG CTTCCCGGAC
ACCCGCGAGA TCGCCGTCGA TGTCATCGAG GACGACGAGA CGATCACTGT GCTCGCCGAC
CTCCCTGGCT TCGACGCCGA CGGAATCGAG GTGGAACTCC ACGACGAGAC TCTCTCGATC
ACGGCCACCC ACGACGAGAC GCGGGACACG GAGGTGACCG TCGACGAGGA CGACGCCACT
GCGGACGACG CAGTTGAGGG CGACGCGGCC GAGGGTGCCG ACACGGGCGG CGACGACAGC
TCCGAGGCCG GGGGCGGCGA CGACGTTCGC TACCACCGTC GCGAGCGCCG TCGCCGCGCG
GTGTCGCGTC GGATTCCGAT CCCCGAGCCC GTCGACCGCG ACGGCGCGAC CGCCTCGTAC
GACGACGGTG TACTCACCGT CACCCTTCCC AAGCGGTCGT CGGACGATGC CGGCCACAAC
ATCGACGTGT CGTGA
 
Protein sequence
MTRRDRFTEI EDLIERMGRE FEELGGTLDA PGPGVPGFPD TREIAVDVIE DDETITVLAD 
LPGFDADGIE VELHDETLSI TATHDETRDT EVTVDEDDAT ADDAVEGDAA EGADTGGDDS
SEAGGGDDVR YHRRERRRRA VSRRIPIPEP VDRDGATASY DDGVLTVTLP KRSSDDAGHN
IDVS