Gene Hlac_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0305 
Symbol 
ID7401231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp328126 
End bp328485 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content62% 
IMG OID643707367 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_002564979 
Protein GI222478742 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.867238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.137028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGG CACAATCAGT CACTGATGAA TCAACGACGC AGACGGCGTC AGACCTGACT 
GCGTTCCAAC AGAATATCCT CGCGATCCTC TCGGAAGAAG CCATGTACGG GCTCGCGATC
AAACGCGAGC TGGAGTCGTA CTACGACTCC GAGGTGAACC ACGGGCGGCT CTACCCGAAC
CTCGACGACC TCGTCGAGGA CGGGCTCGTC GAGAAGAGCG AGCTCGACAA GCGGACGAAT
CAGTACGAGC TCACCGAGGC GGGCCACGAC GCCGTCCTCG GCCAGCTGGA GTGGGTTCTC
GACCGGTTCG TCACCGACGA AACCCGCGCT GACGAGGTCC GCGCGCTCCT CACCGAGTAA
 
Protein sequence
MSEAQSVTDE STTQTASDLT AFQQNILAIL SEEAMYGLAI KRELESYYDS EVNHGRLYPN 
LDDLVEDGLV EKSELDKRTN QYELTEAGHD AVLGQLEWVL DRFVTDETRA DEVRALLTE