Gene Hlac_0264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0264 
Symbol 
ID7401190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp286080 
End bp286886 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content68% 
IMG OID643707327 
Productprephenate dehydratase 
Protein accessionYP_002564939 
Protein GI222478702 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0450669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.96935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG TCACGCTCGG TCCCGCCGGC ACGTACTCGC ACCGTGCGGC GCGGGCCGTC 
GCCGCCGAGG TGTCGTTCCG CGAGTCGGTC ACCGCCATCG TCGACGCCGT CGCGGCCGGC
GAGTTCGAGC GCGGGGTCGT CCCCATCGAA AACAGCATCG AGGGCTCCGT CACGGAGAGT
CTCGACGCCT TGGCCGACTA CGACGTCTCG GTCACCCGCG AGATCGTCAC CCCGATCCGA
CACGCCCTCC TCGCGCAGGG ACCGGAGTTC GAGGTCGTCG CCAGCCACTC GCAGGCGCTC
GCGCAGTGTC GCAACTGGCT CGAAGAGCAC TACCCGAACG CGGGACTCGA AGCGGTCGCG
TCCACGGCTC GCGGGGTCGA GCGCGCCCGC GAGGACGCCC GGGTCGCCGG GATCGGGCAT
CCGGACAACG CCGGCGACGA TCTGGAAATT CTCGCCGAAG ACATCCAGGA CCGCACCTCC
AACGCGACTC GCTTCCTCGT CGTGGCGCCC GAGTCCGCAC GGTCCGACGC CGGTGGGAAG
ACGACCCTGA TCGTCTACCC GAACGCGAAC TACCCCGGTC TGCTGCTGGA ACTCTTGGAA
GCGTTCGCCG ACCGCAACCT CAACCTCTCG CGGATCGAGT CGCGCCCGAG CGGCGAGCGC
CTCGGCGACT ACCTGTTTCA CTTCGACGTC GACGCCGGGC TCTACGAGGA GCACATGGCG
AAGGCGGTCG AGGATGTCGA GGCGATCGCC GACAACGGCT GGGTGCGCGT GCTCGGGTCG
TACGACACCG AACATGTGTT AGAATGA
 
Protein sequence
MNAVTLGPAG TYSHRAARAV AAEVSFRESV TAIVDAVAAG EFERGVVPIE NSIEGSVTES 
LDALADYDVS VTREIVTPIR HALLAQGPEF EVVASHSQAL AQCRNWLEEH YPNAGLEAVA
STARGVERAR EDARVAGIGH PDNAGDDLEI LAEDIQDRTS NATRFLVVAP ESARSDAGGK
TTLIVYPNAN YPGLLLELLE AFADRNLNLS RIESRPSGER LGDYLFHFDV DAGLYEEHMA
KAVEDVEAIA DNGWVRVLGS YDTEHVLE