Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0264 |
Symbol | |
ID | 7401190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 286080 |
End bp | 286886 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643707327 |
Product | prephenate dehydratase |
Protein accession | YP_002564939 |
Protein GI | 222478702 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0450669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.96935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCG TCACGCTCGG TCCCGCCGGC ACGTACTCGC ACCGTGCGGC GCGGGCCGTC GCCGCCGAGG TGTCGTTCCG CGAGTCGGTC ACCGCCATCG TCGACGCCGT CGCGGCCGGC GAGTTCGAGC GCGGGGTCGT CCCCATCGAA AACAGCATCG AGGGCTCCGT CACGGAGAGT CTCGACGCCT TGGCCGACTA CGACGTCTCG GTCACCCGCG AGATCGTCAC CCCGATCCGA CACGCCCTCC TCGCGCAGGG ACCGGAGTTC GAGGTCGTCG CCAGCCACTC GCAGGCGCTC GCGCAGTGTC GCAACTGGCT CGAAGAGCAC TACCCGAACG CGGGACTCGA AGCGGTCGCG TCCACGGCTC GCGGGGTCGA GCGCGCCCGC GAGGACGCCC GGGTCGCCGG GATCGGGCAT CCGGACAACG CCGGCGACGA TCTGGAAATT CTCGCCGAAG ACATCCAGGA CCGCACCTCC AACGCGACTC GCTTCCTCGT CGTGGCGCCC GAGTCCGCAC GGTCCGACGC CGGTGGGAAG ACGACCCTGA TCGTCTACCC GAACGCGAAC TACCCCGGTC TGCTGCTGGA ACTCTTGGAA GCGTTCGCCG ACCGCAACCT CAACCTCTCG CGGATCGAGT CGCGCCCGAG CGGCGAGCGC CTCGGCGACT ACCTGTTTCA CTTCGACGTC GACGCCGGGC TCTACGAGGA GCACATGGCG AAGGCGGTCG AGGATGTCGA GGCGATCGCC GACAACGGCT GGGTGCGCGT GCTCGGGTCG TACGACACCG AACATGTGTT AGAATGA
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Protein sequence | MNAVTLGPAG TYSHRAARAV AAEVSFRESV TAIVDAVAAG EFERGVVPIE NSIEGSVTES LDALADYDVS VTREIVTPIR HALLAQGPEF EVVASHSQAL AQCRNWLEEH YPNAGLEAVA STARGVERAR EDARVAGIGH PDNAGDDLEI LAEDIQDRTS NATRFLVVAP ESARSDAGGK TTLIVYPNAN YPGLLLELLE AFADRNLNLS RIESRPSGER LGDYLFHFDV DAGLYEEHMA KAVEDVEAIA DNGWVRVLGS YDTEHVLE
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