Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0262 |
Symbol | |
ID | 7401188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 284500 |
End bp | 285369 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643707325 |
Product | hypothetical protein |
Protein accession | YP_002564937 |
Protein GI | 222478700 |
COG category | [S] Function unknown |
COG ID | [COG2138] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.437952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTCGC TCGTCATCGT CGCACACGGC TCGCACCTCA ATCCGGGGTC GAGCGCGCCG ACGTACGACC ACGCGGACAC GATCCGCGCG ACCGGGGCCT TCGACGAGGT GAAAACCGGT TTCTGGAAAG AGGAGCCGCA CTTCCGAGAA GTGCTCCGCA CCGTCGAGGG CGACGAGATC TACGTCGTCC CGCTGTTCAT CTCGGAGGGC TACTTCACCG AGCAGGTGAT TCCCCGCGAA CTCCGCCTCG ACGGCTGGGA CGTTTCCGAG TGGAACTCCG ACGGCCTCTC CGCCGATCAG GCCACCCTCA TCGCCGAAGA CATCGACCGG GAGGTCCACT ACTGCGGTCC AGTGGGGACC CACCGCGCGA TGACCGACGT GATCGTCCGG CGCGCGGAGT CGGTCACCGG CAACTCCGAC GTGGGCGAGG GGTTCGGGCT CGCCGTCGTC GGCCACGGTA CCGAGCGCAA CGAGAACTCG GCGAAAGCGG TCCAGTACCA CGCCGACCGG ATCGCCGAGC GCGACCGCTT CGACGAGGTG AAGGCGCTCT ACATGGACGA AGATCCCGAG GTCGACGACC TCCCCGAGTT CTTCGAGAGC GACGACGTGG TTCTGGTCCC GCTCTTTATC GCCGACGGCT ACCACACCCA AGAGGACATC CCGGAGGACG TGGGACTCTG TGAGGACCAT ACAGAGGGGT ACGATGTGCC CACTGAGGTC GACGGCACCC GGATCTGGTA CGCGGGCGCG GTCGGCACCG AACCCCTGAT GGCCGACGTA ATACTCGAGC GCGCGGCCGA CGCCGGCGCC GACCTCGGGA CCGCGCTCGA CGACGTGCGC GAGACGACCC GCGTCGCCAC GGGGGACTGA
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Protein sequence | MQSLVIVAHG SHLNPGSSAP TYDHADTIRA TGAFDEVKTG FWKEEPHFRE VLRTVEGDEI YVVPLFISEG YFTEQVIPRE LRLDGWDVSE WNSDGLSADQ ATLIAEDIDR EVHYCGPVGT HRAMTDVIVR RAESVTGNSD VGEGFGLAVV GHGTERNENS AKAVQYHADR IAERDRFDEV KALYMDEDPE VDDLPEFFES DDVVLVPLFI ADGYHTQEDI PEDVGLCEDH TEGYDVPTEV DGTRIWYAGA VGTEPLMADV ILERAADAGA DLGTALDDVR ETTRVATGD
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