Gene Hlac_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0233 
Symbol 
ID7402162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp252422 
End bp253195 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content75% 
IMG OID643707296 
Productcobalamin 5'-phosphate synthase 
Protein accessionYP_002564908 
Protein GI222478671 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.336917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGA CCGCGCTCCG CGGGGCGCTC GGCTTCCTCA CCCGAATCCC GGTCGGCCGC 
GACGAGGCGG CGTGGGCGGC GTTCGCGCGG TCGCCGTGGA CGTTCCCGGT CGTCGGGTAC
CTCGTCGGCG GGCTCGTTGC CCTCTCCCTG TTCGTGCCTG CGCCCGCCCC TACGGTCGCG
CTCGCGTTCG TCCTCGCCGT CTACGCCGTC ACTGGGATCG GTCACCTCGA CGGCGTGGCC
GACATCGGCG ACGCCGCGGC CGTCCACGGG GACCGCGAGG AGCGCCGGCG CGTGCTGAAA
GACTCCGCGC TCGGCGTCGG CGGGACGGTC GCGCTCGCGC TCGTCGTGCT CGGGCTGGCG
ACCGCCGCGC TCGGACTGGT CGAGGTTGCG GCGACCGCGG GGGACGGGGG ACCTCTCCCC
CCTGTGATCG GAATCGTTGT CGCCGCCGAG GTCGGCGCGA AGGCCGCGAC GGCGACGCTC
GTCTGCGTCG GGGACGCGCC CCACGAAGGG CTCGGCTCCG CGCTGACCGG CGAGTCGTCT
CCCGGCGCGA CGCTCTCGGT CTTCGCGCTG GCGGCGCCGG CCGCCCTACT CACGTGGCCT
CAGGTCCTAC CGGGTCTCGC GGCGCTTCTT GTTGCGCTGG CGACGGCGGC GCTCGTCGCC
CGGTGGTCCC GCCGACGACT CGGCGGCGTC TCCGGCGACG TGCTCGGCGC GACCACCGAA
CTCGCGCGGG TCGCCGCGCT GCACGCGGGG GTGATCGCGT GGACGCGCTT CTGA
 
Protein sequence
MILTALRGAL GFLTRIPVGR DEAAWAAFAR SPWTFPVVGY LVGGLVALSL FVPAPAPTVA 
LAFVLAVYAV TGIGHLDGVA DIGDAAAVHG DREERRRVLK DSALGVGGTV ALALVVLGLA
TAALGLVEVA ATAGDGGPLP PVIGIVVAAE VGAKAATATL VCVGDAPHEG LGSALTGESS
PGATLSVFAL AAPAALLTWP QVLPGLAALL VALATAALVA RWSRRRLGGV SGDVLGATTE
LARVAALHAG VIAWTRF